HHsearch alignment for GI: 255764476 and conserved domain: PRK11388
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional.
Probab=96.98 E-value=0.02 Score=34.53 Aligned_cols=151 Identities=16% Similarity=0.150 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCEEEEC--HHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99999999999851680058981599289852--5789873677877566101585338967899998612578703457
Q gi|255764476|r 188 LSNHISVFKVLFDSLDFLVWHRDQAGDILWAN--ISYKKNTETEGIVFQKAIGESRKLFKEEIKKRMISSSALEKNFCET 265 (792)
Q Consensus 188 L~~~~~~lr~llda~P~~vw~~D~dGri~~vN--~A~~~~~e~~~~~~~~~i~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 265 (792)
T Consensus 57 a~p~l~~l~~~l~~~~~~v~l~D~~G~vL~~~G~~~~~~~~~~~~~------~~G~~wsE-----~~~GTNaiGtaL~~~ 125 (639)
T PRK11388 57 GQAALEDAYEYMEPRECALLILDETGCILSRNGDPQTLQQLSALGF------NDGTYCAE-----GIIGTNALSLAAISG 125 (639)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCC------CCCCEEEE-----CCCCCCHHHHHHHHC
T ss_conf 9999999999866798399999899529998359889889996697------67864222-----588865899999749
Q ss_pred EEEEECCEEEEE------EEEEEEC--CCCE-EEEEEEHHH----------------HHHHHHHHH-------------H
Q ss_conf 888656907899------9997632--8952-999830458----------------999887889-------------9
Q gi|255764476|r 266 VSTLEHGNNKSY------KIVRVLN--SFGE-AGIAIDVSK----------------EITVNDQLT-------------H 307 (792)
Q Consensus 266 ~~~~~~G~rr~~------~v~~~~~--~~G~-~Gia~DITE----------------rk~ae~aLr-------------r 307 (792)
T Consensus 126 ~pv~V~g~EHf~~~~~~~sC~aaPI~d~~G~l~Gv-ldlt~~~~~~~~~~l~lv~~~a~~Ie~~L~~~~~~~~~~~~l~~ 204 (639)
T PRK11388 126 QPVQTMGDQHFKQALHNWAFCATPVFDSKGRLTGT-IALACPVEQTSAADLPLTLAIAREVGNLLLTDSLLAESNRHLNQ 204 (639)
T ss_pred CEEEECHHHHHHHHCCCCEEEEEEEECCCCCEEEE-EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 83898156767675058867775678899978999-97678766678435999999999999999999999999999877
Q ss_pred HHHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHHCCC
Q ss_conf 9999843089599984898089853688855099978960499
Q gi|255764476|r 308 TYEILHNLTVAIAIFDQNRYLQFHNRSFVELWEIDLAFLATNP 350 (792)
Q Consensus 308 ~~e~Ld~l~~~v~ifd~~~rl~~~N~a~~~l~gl~~~~l~~~p 350 (792)
T Consensus 205 ~~~~l~~~~~gvla~d~~G~i~~~N~~A~~~L~~~~~~~~g~~ 247 (639)
T PRK11388 205 LNALLESMDDGVIAWDEQGNLQFLNAQAARLLRLDATASQGRA 247 (639)
T ss_pred HHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHCCCHHHHCCCC
T ss_conf 6888648876289988999174004899988598845644764