HHsearch alignment for GI: 255764476 and conserved domain: PRK13837

>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=100.00  E-value=0  Score=417.96  Aligned_cols=238  Identities=17%  Similarity=0.302  Sum_probs=207.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             3206899998888999999999999999--99999666632258999999999735777889989999999999999999
Q gi|255764476|r  543 VNVTDSVRAERALTEKNEALRKADEIKN--SFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTIL  620 (792)
Q Consensus       543 ~DIT~~k~~E~aL~e~~eale~a~~lk~--~F~~~vSHELrtPLt~I~G~a~lL~~~~~g~l~~~q~e~~~~I~~s~~~l  620 (792)
T Consensus       425 ~~~~~~~r~etER~~LE~qL~qAQKmEAiG~LAgGIAHDFNNiLt~I~G~aeLa~~~l--~~~~~~~~~L~~I~~aa~Ra  502 (831)
T PRK13837        425 CHAIERRRLETERDALERRLEHARRLEAVGTLASGIAHNFNNILGAILGYAEMALNKL--RRHSRARRHIDEIISSGDRA  502 (831)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHH
T ss_conf             8799998879999999999999999999999998999987008999999999986206--99847789999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998851498300023306999999999999999984896899995698608998789999999999886775
Q gi|255764476|r  621 LNLVNDILDLATVDAGIMKLNYSTIVLNDLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQRLLQIFSKILSNAMD  700 (792)
Q Consensus       621 ~~li~diLdls~i~aG~~~l~~~~vdl~~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~rL~QVl~NLl~NAik  700 (792)
T Consensus       503 ~~Lv~qLL~FSR~----~~~~~~~vdl~~lv~e~~~llr~~l-~~~I~l~~~~~~~~~~V~aD~~QL~QVllNL~~NA~d  577 (831)
T PRK13837        503 RLIIDQILTFGRK----GERRTKPFSLSELVTEIAPLLRVSL-PPTVELDFDFDQEPAVVEGNPAQLQQVILNLCKNAAQ  577 (831)
T ss_pred             HHHHHHHHHHHCC----CCCCCCEECHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHH
T ss_conf             9999999998589----9997717749999999999999875-8986999971898853888799999999999999999


Q ss_pred             CCCCCCEEEEEEEE---------------ECCEEEEEEEECCCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf             38886889999998---------------799899999978897897786541488376268988885663799999999
Q gi|255764476|r  701 FSSKGSTVILKAAR---------------DNGDFIFSVKNNGSSIPEDMCKSVFNRFVSNAHRGQRRGVGLGLSIVESFI  765 (792)
Q Consensus       701 ~~~~gg~I~i~~~~---------------~~~~v~i~V~D~G~GI~~e~~~riF~~F~~~~~~~~~~GtGLGLsiv~~iV  765 (792)
T Consensus       578 AM~~gG~l~I~~~~~~~~~~~~~~~~~~~~G~yv~L~VsDtG~GI~~e~l~RIFEPFFTTK~----~GTGLGLAvV~gIV  653 (831)
T PRK13837        578 AMDENGRVDIRLSRVDLRKPKVLAHGTAPPGRYVLLRVSDTGRGIDEAVLPHIFEPFFTTRA----RGTGLGLATVHGIV  653 (831)
T ss_pred             HCCCCCEEEEEEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCC----CCCCCCHHHHHHHH
T ss_conf             76799869999855533632321157789989899999867999898999660489867889----98874699999999


Q ss_pred             HHCCCEEEEEEECCCCEEEEEEEECC
Q ss_conf             96198699997889943999997347
Q gi|255764476|r  766 NLHGGHVSISSSDEGVTTINCRIPSK  791 (792)
Q Consensus       766 e~hgG~I~v~S~~G~Gttf~v~lP~~  791 (792)
T Consensus       654 ~~hgG~I~V~S~pG~GTtF~v~LP~~  679 (831)
T PRK13837        654 SAHAGYIDVQSTVGRGTRFDVYLPPS  679 (831)
T ss_pred             HHCCCEEEEECCCCCCEEEEEEEECC
T ss_conf             98698699972699971899983179