HHsearch alignment for GI: 255764476 and conserved domain: pfam00989

>pfam00989 PAS PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.

Probab=98.69  E-value=7.7e-08  Score=71.57  Aligned_cols=103  Identities=15%  Similarity=0.246  Sum_probs=56.6

Q ss_pred             HHHHHHCCCCEEEECCCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             99996203432899689848864058887828987894389838898877763025611468899874026544311568
Q gi|255764476|r  437 GETIDHLSEGVAVFGPDGRIKLSNPAFRSLWKTEENRLSPGTHIRNIAATCSRYYNESDGWDLFAAIITSFDDERKSLQG  516 (792)
Q Consensus       437 ~~~ld~l~e~vav~~~dgr~~~~N~a~~~l~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~r~~~~~  516 (792)
T Consensus         4 r~i~e~~~~~i~~~D~~g~i~~~N~a~~~l~G~~~~el~G~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~e~   77 (112)
T pfam00989         4 RAILESLPDGIFVVDEDGRILYVNAAAEELLGLSREEVIGKSLLDLIPEE-----DDAEVAELLRQALLQ-GEESRGGEV   77 (112)
T ss_pred             HHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCC-----CHHHHHHHHHHHHHC-CCCEEEEEE
T ss_conf             99998342461999899999999165332258636674375201245753-----439999999999981-997688776


Q ss_pred             EEEECCEEE--EEEEEEECCC--C--CEEEECCCC
Q ss_conf             999725038--8899997058--8--766312320
Q gi|255764476|r  517 TLELLSDSV--LEYSIIPLPN--A--QTMLTFVNV  545 (792)
Q Consensus       517 ~~~~~dG~~--~~~~~~pl~d--g--~~l~~~~DI  545 (792)
T Consensus        78 ~~~~~dG~~~~~~~~~~pi~d~~g~~g~v~i~rDI  112 (112)
T pfam00989        78 SFRVPDGRPRHVEVRASPVRDAGGEIGFLGVLRDI  112 (112)
T ss_pred             EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEECC
T ss_conf             52879998999999999999199999999999849