RPSBLAST alignment for GI: 255764476 and conserved domain: TIGR03785
>gnl|CDD|163497 TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase. This histidine kinase protein is paired with an adjacent response regulator (TIGR03787) gene. It co-occurs with a variant sortase enzyme (TIGR03784), usually in the same gene neighborhood, in proteobacterial species most of which are marine, and with an LPXTG motif-containing sortase target conserved protein (TIGR03788). Sortases and LPXTG proteins are far more common in Gram-positive bacteria, where sortase systems mediate attachment to the cell wall or cross-linking of pilin structures. We give this predicted sensor histidine kinase the gene symbol psdS, for Proteobacterial Dedicated Sortase system Sensor histidine kinase. Length = 703
Score = 68.2 bits (167), Expect = 8e-12
Identities = 43/218 (19%), Positives = 94/218 (43%), Gaps = 13/218 (5%)
Query: 571 SFVQHVSYELRSPLTNIIGFTDLLKTSKLGSLNSKQSQYVEYISASSTILLNLVNDILDL 630
+ +S+ELR+P+ + + L+ L +L ++ +Y+E + L ++N++ +
Sbjct: 487 NMSSRLSHELRTPVAVVRSSLENLE---LQALEQEKQKYLERAREGTERLSMILNNMSEA 543
Query: 631 ATVDAGIMKLNYSTIVLNDLLNEVKQSIATKMHENNIRIKVISDGKLGSFVADRQRLLQI 690
++ I L+++L+ Q + + + + + Q+
Sbjct: 544 TRLEQAIQSAEVEDFDLSEVLSGCMQGYQMTYPPQRFELNIPETPLVMRGSPEL--IAQM 601
Query: 691 FSKILSNAMDFSSKGSTVILKAARDNGDFIFSVKNNGSSIPEDMCKSVFNRFVS----NA 746
K++ NA +FS + + + +++ + +V N G +PEDM + +F+ VS A
Sbjct: 602 LDKLVDNAREFSPEDGLIEVGLSQNKSHALLTVSNEGPPLPEDMGEQLFDSMVSVRDQGA 661
Query: 747 HRGQRRGVGLGLSIVESFINLHGGHVSI--SSSDEGVT 782
+GLGL IV + H G + ++GV
Sbjct: 662 QDQPH--LGLGLYIVRLIADFHQGRIQAENRQQNDGVV 697