HHsearch alignment for GI: 255764477 and conserved domain: COG0125
>COG0125 Tmk Thymidylate kinase [Nucleotide transport and metabolism].
Probab=98.43 E-value=1e-05 Score=56.24 Aligned_cols=182 Identities=20% Similarity=0.193 Sum_probs=85.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHHH----CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCHHHHHHHHHH
Q ss_conf 95999888866678999999997----7986999049999985000011356653100012--22111000111100124
Q gi|255764477|r 1 MLIIGLTGSIGTGKTTVAEFLKK----EKIPVISSDDIVDKLYHYEAVDIIKKTFPRSIQN--NKVNKARLLGILQKSPA 74 (199)
Q Consensus 1 M~iIgitG~igSGKStv~~~l~~----~G~~v~~aD~i~~~l~~~~~~~~i~~~fg~~i~~--~~i~r~~l~~~vf~~~~ 74 (199)
T Consensus 3 g~fI~iEGiDGaGKTT~~~~L~~~l~~~g~~v~~t-------rEP~~-~~ige~iR~~ll~~~~~~~~~~e~lLfa--ad 72 (208)
T COG0125 3 GMFIVIEGIDGAGKTTQAELLKERLEERGIKVVLT-------REPGG-TPIGEKIRELLLNGEEKLSPKAEALLFA--AD 72 (208)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE-------ECCCC-CHHHHHHHHHHCCCCCCCCHHHHHHHHH--HH
T ss_conf 62999978888988999999999999829807998-------68999-8699999999738866788899999999--99
Q ss_pred HHHHHHHHHHHHHHHH----HHHHHHH-HHCCCCCCCCCCCCCCCCC-CC---CCCCEEEEEEECCCHHHHHHHHHHCCC
Q ss_conf 6788875348999999----9976677-4202476333456432555-87---564227899952111356888871798
Q gi|255764477|r 75 KLEILEKIVHPMVRMH----EKKILHD-LSCRGEKIVFFDTPLLFEK-RK---EYLFDAVVVVTCSFETQRERVLSRKKH 145 (199)
Q Consensus 75 ~l~~L~~iiHP~V~~~----~~~~i~~-~~~~~~~~vv~e~pLL~E~-~~---~~~~d~vi~V~a~~~~r~~Rl~~R~~~ 145 (199)
T Consensus 73 R~~h~~~~i~pal~~g~vVI~DRy~~Ss~AYQg~~-~~~~~~~~~~l~~~~~~~~~PD~ti~Ldv~~e~al~R~~~r~~~ 151 (208)
T COG0125 73 RAQHLEEVIKPALKEGKVVICDRYVDSSLAYQGGG-RGLDLDWVLALNEFAPGGLKPDLTLYLDVPPEVALERIRKRGEL 151 (208)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH-CCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
T ss_conf 99999999788762899999878313788853530-59998999999976547899988999948889999999832776
Q ss_pred -CHHHHHHH--H-HCCCCHHHHHHHC---CEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf -98999999--9-7299978999868---98998799989999999999999999
Q gi|255764477|r 146 -TEENFLFI--L-SKQMNEKDKISRA---DYVINTEGTIEAIEKETQKMLKYILK 193 (199)
Q Consensus 146 -s~e~~~~~--~-~~Q~~~~~k~~~a---D~vI~N~~s~~~l~~~i~~~~~~i~~ 193 (199)
T Consensus 152 ~~r~E~~~~~f~~kvr~~Y~~la~~~~~r~~vIda~~~~e~v~~~i~~~l~~~l~ 206 (208)
T COG0125 152 RDRFEKEDDEFLEKVREGYLELAAKFPERIIVIDASRPLEEVHEEILKILKERLG 206 (208)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 5515667789999999999999861877189998999979999999999998743