HHsearch alignment for GI: 255764477 and conserved domain: PRK03839

Probab=99.28  E-value=1.5e-10  Score=86.55  Aligned_cols=144  Identities=20%  Similarity=0.251  Sum_probs=88.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHC-CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             59998888666789999999977-986999049999985000011356653100012-2211100011110012467888
Q gi|255764477|r    2 LIIGLTGSIGTGKTTVAEFLKKE-KIPVISSDDIVDKLYHYEAVDIIKKTFPRSIQN-NKVNKARLLGILQKSPAKLEIL   79 (199)
Q Consensus         2 ~iIgitG~igSGKStv~~~l~~~-G~~v~~aD~i~~~l~~~~~~~~i~~~fg~~i~~-~~i~r~~l~~~vf~~~~~l~~L   79 (199)
T Consensus         1 M~I~ITGTPGtGKTTva~~La~~lg~~~i~v~~la~~~---~~--------~~~~d~~~~iD~--------------d~l   55 (180)
T PRK03839          1 MIIAITGTPGVGKTTISKLLAEKLGYEYVNLRDFALEK---GI--------GEEKDDELEIDV--------------DEL   55 (180)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHC---CC--------CCCCCCCCCCCH--------------HHH
T ss_conf             98999789999989999999997698798799999983---99--------867677504659--------------999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCC-
Q ss_conf             7534899999999766774202476333456432555875642278999521113568888717989899999997299-
Q gi|255764477|r   80 EKIVHPMVRMHEKKILHDLSCRGEKIVFFDTPLLFEKRKEYLFDAVVVVTCSFETQRERVLSRKKHTEENFLFILSKQM-  158 (199)
Q Consensus        80 ~~iiHP~V~~~~~~~i~~~~~~~~~~vv~e~pLL~E~~~~~~~d~vi~V~a~~~~r~~Rl~~R~~~s~e~~~~~~~~Q~-  158 (199)
T Consensus        56 ~~~~~~~-----------~~--~-~~~ivd~H~---~h~~p-~D~VIVLR~~P~iL~~RL~~R-gYs~~KI~ENveaEil  116 (180)
T PRK03839         56 AYFVEEE-----------FK--G-KNVVLDGHL---SHLMP-ADLVIVLRAHPKLIAERLKER-GYSKKKIGENVEAELV  116 (180)
T ss_pred             HHHHHHH-----------HC--C-CCEEEEEEC---CCCCC-CCEEEEEECCHHHHHHHHHHC-CCCHHHHHHHHHHHHH
T ss_conf             9999987-----------34--8-988998643---14636-877999978869999999976-9998999999999999


Q ss_pred             --CHHHHHHH--CCEEEECC-CCHHHHHHHHHHHHH
Q ss_conf             --97899986--89899879-998999999999999
Q gi|255764477|r  159 --NEKDKISR--ADYVINTE-GTIEAIEKETQKMLK  189 (199)
Q Consensus       159 --~~~~k~~~--aD~vI~N~-~s~~~l~~~i~~~~~  189 (199)
T Consensus       117 ~vil~Ea~e~~~~~~eidtt~~~pe~v~~~I~~~i~  152 (180)
T PRK03839        117 DVILIEALEEHENVIEVDTTNKTPEEVVEEILNLIK  152 (180)
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             999999998439889998999999999999999995