HHsearch alignment for GI: 255764477 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=91.79 E-value=0.6 Score=26.37 Aligned_cols=37 Identities=27% Similarity=0.272 Sum_probs=29.8
Q ss_pred EEEECCCCCCHHHHHHHHH----HCCCE--EEEHHHHHHHHHH
Q ss_conf 9988886667899999999----77986--9990499999850
Q gi|255764477|r 4 IGLTGSIGTGKTTVAEFLK----KEKIP--VISSDDIVDKLYH 40 (199)
Q Consensus 4 IgitG~igSGKStv~~~l~----~~G~~--v~~aD~i~~~l~~ 40 (199)
T Consensus 101 vil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~~L~~ 143 (254)
T PRK06526 101 VVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVARLAA 143 (254)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
T ss_conf 8998999986899999999999986996799877999999999