HHsearch alignment for GI: 255764477 and conserved domain: PRK07261

>PRK07261 topology modulation protein; Provisional.
Probab=97.84  E-value=1.2e-05  Score=55.74  Aligned_cols=95  Identities=20%  Similarity=0.260  Sum_probs=56.7

Q ss_pred             EEEEEECCCCCCHHHHHHHHHH-CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             5999888866678999999997-798699904999998500001135665310001222111000111100124678887
Q gi|255764477|r    2 LIIGLTGSIGTGKTTVAEFLKK-EKIPVISSDDIVDKLYHYEAVDIIKKTFPRSIQNNKVNKARLLGILQKSPAKLEILE   80 (199)
Q Consensus         2 ~iIgitG~igSGKStv~~~l~~-~G~~v~~aD~i~~~l~~~~~~~~i~~~fg~~i~~~~i~r~~l~~~vf~~~~~l~~L~   80 (199)
T Consensus         1 MrI~IiG~sGsGKSTlAr~L~~~~~ip~~~LD~l~w---~p~w~~~~~------------------------~e~~~~~~   53 (171)
T PRK07261          1 MKIAIIGYSGSGKSTLARFLGQHYNCPVLHLDQLHF---SSNWQERDD------------------------DDMIADIS   53 (171)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCEEE---CCCCEECCH------------------------HHHHHHHH
T ss_conf             989998899986899999999987979797022788---899988889------------------------99999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCEEEEEEECCCHHHHHHHHHH
Q ss_conf             53489999999976677420247633345643---255587564227899952111356888871
Q gi|255764477|r   81 KIVHPMVRMHEKKILHDLSCRGEKIVFFDTPL---LFEKRKEYLFDAVVVVTCSFETQRERVLSR  142 (199)
Q Consensus        81 ~iiHP~V~~~~~~~i~~~~~~~~~~vv~e~pL---L~E~~~~~~~d~vi~V~a~~~~r~~Rl~~R  142 (199)
T Consensus        54 ~------------~~~-----~~~-WIiDGny~~~~~~~-rl~~aD~iI~Ld~p~~~~l~rvikR   99 (171)
T PRK07261         54 N------------FLL-----KQD-WIIEGNYSNCLYEE-RMAEADQIIFLNFSRFNCLYRAFKR   99 (171)
T ss_pred             H------------HHH-----CCC-EEEECCCCCHHHHH-HHHHCCEEEEECCCHHHHHHHHHHH
T ss_conf             9------------984-----898-79947851247776-7977999999858499999999999