HHsearch alignment for GI: 255764477 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=93.33 E-value=0.042 Score=33.65 Aligned_cols=22 Identities=45% Similarity=0.557 Sum_probs=15.2
Q ss_pred EEEEECCCCCCHHHH-HHHHHHC
Q ss_conf 999888866678999-9999977
Q gi|255764477|r 3 IIGLTGSIGTGKTTV-AEFLKKE 24 (199)
Q Consensus 3 iIgitG~igSGKStv-~~~l~~~ 24 (199)
T Consensus 247 IiLVTGPTGSGKtTTLYaaL~~L 269 (495)
T TIGR02533 247 IILVTGPTGSGKTTTLYAALSRL 269 (495)
T ss_pred EEEECCCCCCCHHHHHHHHHHHH
T ss_conf 18841778985258899999863