HHsearch alignment for GI: 255764477 and conserved domain: cd00464
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.
Probab=98.85 E-value=6.1e-08 Score=70.20 Aligned_cols=137 Identities=26% Similarity=0.272 Sum_probs=78.5
Q ss_pred EEEECCCCCCHHHHHHHHHH-CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99888866678999999997-79869990499999850000113566531000122211100011110012467888753
Q gi|255764477|r 4 IGLTGSIGTGKTTVAEFLKK-EKIPVISSDDIVDKLYHYEAVDIIKKTFPRSIQNNKVNKARLLGILQKSPAKLEILEKI 82 (199)
Q Consensus 4 IgitG~igSGKStv~~~l~~-~G~~v~~aD~i~~~l~~~~~~~~i~~~fg~~i~~~~i~r~~l~~~vf~~~~~l~~L~~i 82 (199)
T Consensus 2 I~LiG~~G~GKstigk~la~~l~~~fiD~D~~Ie~~~g~si~eif-~~~Ge~~--------------F------R~~E~- 59 (154)
T cd00464 2 IVLIGMMGAGKTTVGRLLAKALGLPFVDLDELIEQRAGMSIPEIF-AEEGEEG--------------F------RELER- 59 (154)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHCCCHHHHH-HHCCHHH--------------H------HHHHH-
T ss_conf 899889999889999999999798979685999999499999999-8749387--------------8------99999-
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCC--CCCCEEEEEEECCCHHHHHHHHHHC--C----CCHHHHHH
Q ss_conf 489999999976677420247633345--643255587--5642278999521113568888717--9----89899999
Q gi|255764477|r 83 VHPMVRMHEKKILHDLSCRGEKIVFFD--TPLLFEKRK--EYLFDAVVVVTCSFETQRERVLSRK--K----HTEENFLF 152 (199)
Q Consensus 83 iHP~V~~~~~~~i~~~~~~~~~~vv~e--~pLL~E~~~--~~~~d~vi~V~a~~~~r~~Rl~~R~--~----~s~e~~~~ 152 (199)
T Consensus 60 ----------~~l~~~~~-~~~~VIs~GGG~v~~~~~~~~l~~~~~vI~L~~~~~~l~~Rl~~~~~RPll~~~~~~~l~~ 128 (154)
T cd00464 60 ----------EVLLLLLT-KENAVIATGGGAVLREENRRLLLENGIVVWLDASPEELLERLARDKTRPLLQDEDPERLRE 128 (154)
T ss_pred ----------HHHHHHHC-CCCEEEECCCCCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf ----------99999856-8985997389733689999999957908999579999999960799999888999999999
Q ss_pred HHHCCCCHHHHHHHCCEEEECCC
Q ss_conf 99729997899986898998799
Q gi|255764477|r 153 ILSKQMNEKDKISRADYVINTEG 175 (199)
Q Consensus 153 ~~~~Q~~~~~k~~~aD~vI~N~~ 175 (199)
T Consensus 129 l~~~R--~~~Y~~~Ad~~i~~~~ 149 (154)
T cd00464 129 LLEER--EPLYREVADLTIDTDE 149 (154)
T ss_pred HHHHH--HHHHHHHCCEEEECCC
T ss_conf 99999--9999987999997989