HHsearch alignment for GI: 255764477 and conserved domain: cd01672
>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).
Probab=98.57 E-value=1.1e-06 Score=62.33 Aligned_cols=67 Identities=13% Similarity=0.102 Sum_probs=43.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHCCCCHHHHH-----HHHHCCCCHHHHH-HH-C-CEEEECCCCHHHHHHHHHHHHH
Q ss_conf 4227899952111356888871798989999-----9997299978999-86-8-9899879998999999999999
Q gi|255764477|r 121 LFDAVVVVTCSFETQRERVLSRKKHTEENFL-----FILSKQMNEKDKI-SR-A-DYVINTEGTIEAIEKETQKMLK 189 (199)
Q Consensus 121 ~~d~vi~V~a~~~~r~~Rl~~R~~~s~e~~~-----~~~~~Q~~~~~k~-~~-a-D~vI~N~~s~~~l~~~i~~~~~ 189 (199)
T Consensus 125 ~PDl~i~Ld~~pe~~~~Ri~~R~~~~~~e~~~~~~~~kv~~--~Y~~~~~~~~~~~~vIDa~~~~eev~~~I~~~i~ 199 (200)
T cd01672 125 KPDLTILLDIDPEVGLARIEARGRDDRDEQEGLEFHERVRE--GYLELAAQEPERIIVIDASQPLEEVLAEILKAIL 199 (200)
T ss_pred CCCEEEEEECCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHH--HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99989998179999999998468987276515999999999--9999997588978998699999999999999971