HHsearch alignment for GI: 255764477 and conserved domain: cd02026
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. This enzyme catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=99.27 E-value=3.9e-12 Score=96.52 Aligned_cols=159 Identities=24% Similarity=0.240 Sum_probs=94.7
Q ss_pred EEEEECCCCCCHHHHHHHHHH----CCCEEEEHHHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999888866678999999997----7986999049999985000011-35665310001222111000111100124678
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFLKK----EKIPVISSDDIVDKLYHYEAVD-IIKKTFPRSIQNNKVNKARLLGILQKSPAKLE 77 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l~~----~G~~v~~aD~i~~~l~~~~~~~-~i~~~fg~~i~~~~i~r~~l~~~vf~~~~~l~ 77 (199)
T Consensus 1 IIgVaG~SGSGKTTv~~~i~~ifg~~~v~vI~~D~Yhr--~dr~~r~~~~~t~~~P----~And~dll~~~l----~~Lk 70 (273)
T cd02026 1 IIGVAGDSGCGKSTFLRRLTSLFGSDLVTVICLDDYHS--LDRKGRKETGITALDP----RANNFDLMYEQL----KALK 70 (273)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--CCHHHHHHHCCCCCCC----CHHHHHHHHHHH----HHHH
T ss_conf 98997888786999999999985848769996577788--9989998718776897----523499999999----9998
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCEEEEEEECCCHHHHHHHHHHC----CCCHHHHH
Q ss_conf 88753489999999-976677420247633345643-2555875642278999521113568888717----98989999
Q gi|255764477|r 78 ILEKIVHPMVRMHE-KKILHDLSCRGEKIVFFDTPL-LFEKRKEYLFDAVVVVTCSFETQRERVLSRK----KHTEENFL 151 (199)
Q Consensus 78 ~L~~iiHP~V~~~~-~~~i~~~~~~~~~~vv~e~pL-L~E~~~~~~~d~vi~V~a~~~~r~~Rl~~R~----~~s~e~~~ 151 (199)
T Consensus 71 ~Gk~i~~Pv-Ydh~tg~~~~~e~i~p~diII~EGLh~l~~~~lrdl~DLkIfVD~d~dlr~~rKI~RD~~ERGyS~E~V~ 149 (273)
T cd02026 71 EGQAIEKPI-YNHVTGLIDPPELIKPTKIVVIEGLHPLYDERVRELLDFSVYLDISDEVKFAWKIQRDMAERGHSLEDVL 149 (273)
T ss_pred CCCCCCCCC-CCCCCCCCCCCEEECCCCEEEEECEECCCCHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 599534322-2145896577565068747999220002668898660746885687647999987766766488999999
Q ss_pred HHHHCCCCHHHH-----HHHCCEEEE
Q ss_conf 999729997899-----986898998
Q gi|255764477|r 152 FILSKQMNEKDK-----ISRADYVIN 172 (199)
Q Consensus 152 ~~~~~Q~~~~~k-----~~~aD~vI~ 172 (199)
T Consensus 150 ~~I~rR~pDy~~yI~PQk~~ADI~iq 175 (273)
T cd02026 150 ASIEARKPDFEAYIDPQKQYADVVIQ 175 (273)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 99986047889750757500128999