HHsearch alignment for GI: 255764477 and conserved domain: cd03220
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=93.15 E-value=0.089 Score=31.57 Aligned_cols=21 Identities=43% Similarity=0.662 Sum_probs=19.5
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999888866678999999997
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFLKK 23 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l~~ 23 (199)
T Consensus 50 ivgilG~NGaGKSTLl~~i~G 70 (224)
T cd03220 50 RIGLIGRNGAGKSTLLRLLAG 70 (224)
T ss_pred EEEEECCCCCHHHHHHHHHHC
T ss_conf 999997999819999999975