HHsearch alignment for GI: 255764477 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=93.66 E-value=0.064 Score=32.49 Aligned_cols=21 Identities=38% Similarity=0.665 Sum_probs=19.3
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999888866678999999997
Q gi|255764477|r 3 IIGLTGSIGTGKTTVAEFLKK 23 (199)
Q Consensus 3 iIgitG~igSGKStv~~~l~~ 23 (199)
T Consensus 28 ~~~l~G~NGsGKTTl~~~l~G 48 (144)
T cd03221 28 RIGLVGRNGAGKSTLLKLIAG 48 (144)
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999998999849999999848