HHSEARCH alignment of GI: 255764478 and SCOP domain: d1zjca1

Alignment
>d1zjca1 e.60.1.1 (A:3-415) Aminopeptidase S, AMPS {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00  E-value=0  Score=832.67  Aligned_cols=406  Identities=34%  Similarity=0.584  Sum_probs=397.1

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCHHHHHH--CCH
Q ss_conf             999999999999873134799769998165358999999999998289886898727489899760598789862--433
Q gi|255764478|r   13 EFLLEKLAKVALQVGVNIQEGQHLIVMAPVSALPLARLITKHAYMLGAGLVSVFYKDSEATLMLYKYGADYAFDR--VAD   90 (418)
Q Consensus        13 ~~~L~kyA~llV~~~lniqkGe~VlI~~d~~a~~l~ral~~aa~~~GA~~V~v~~~d~~~~r~~~~~a~~e~l~~--~p~   90 (418)
                      +++|+|||+++|++|+||||||+|||+++.++.||+|+|+++||++||+||++.|.|+.++|.+|.++++++|..  +|.
T Consensus         3 ~~~L~k~A~llV~~~l~vqkGe~VlI~a~~~~~~lvral~~~a~~aGA~pV~v~~~d~~i~r~~~~~~~~e~l~~~e~~~   82 (413)
T d1zjca1           3 KEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEIKS   82 (413)
T ss_dssp             HHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEEEECHHHHHHHHHHSCHHHHHHTSSCH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHCCCCCHH
T ss_conf             89999999999998306899998999956743999999999999869964899508789999987189966835320256


Q ss_pred             HHHHHHHHHHHCCCEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCH
Q ss_conf             67999999984797899981597324307998899988898899989999998458873599965998999873689997
Q gi|255764478|r   91 WFCEGLAKAYSDNTALLSISGDNPLLLVNEDSDKVSRVNQAYLKAYKPALERISNFDINWSIVPFPSCAWAEIVYPDDPV  170 (418)
Q Consensus        91 ~~~~~~~~~~~~~~a~i~i~~~np~~l~~vd~~ki~~~~~a~~~~~k~~~~~~~~~~~~W~i~~~Pt~awA~~vfp~~~~  170 (418)
                      |..+.+.++++..++++++.+++|++|+++||+|++++++++++++++++.+.+.++++||+++|||++|||++||+++.
T Consensus        83 ~~~~~~~~~~~~~~a~i~i~~~~p~~l~~vd~~ki~~~~~a~~~~~k~~~~~~~~~~~~W~i~~~Pt~a~A~~a~~~l~~  162 (413)
T d1zjca1          83 YDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSV  162 (413)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCCTTTTTTSCHHHHHHHHHHHHHHTHHHHHHHHTTCSCEEEEECCCHHHHHHHCTTSCH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCH
T ss_conf             67999999986588489972689524203798999999999999989999998647656699956876777664589987


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEECCCCCC-CCCCCC
Q ss_conf             7899999999999974266597999999999999999973016847999976996499995588262278860-258971
Q gi|255764478|r  171 PIAIAKLANTIFSVSRAHCIDPIAAWAEHNNFLHQKSQWLSQRDFAEIRFSGPNTSLKVGLAEGHRWSGGSSI-AQNGIM  249 (418)
Q Consensus       171 ~~s~~~l~~~if~a~~~d~~Dpv~~w~~~~~~~~~~~~~Ln~~~~~~i~~~~~gTDLt~~l~~~~~w~~~~~~-~~~G~~  249 (418)
                      +|++++||+++|++|++|.+||+++|++|.+.|++++++||+++++.+|++++||||+|+++++|.|.+++++ ++.+..
T Consensus       163 ~e~~~~~~d~if~a~~lD~~dpv~~w~~~~~~l~~~~~~L~~~~~~~~~~~~~gTDLt~~l~~~~~~~~~~~~~~~~~~~  242 (413)
T d1zjca1         163 EEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKEQA  242 (413)
T ss_dssp             HHHHHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEETTEEEEEEECTTBCCBCSEEEGGGTSSE
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCCC
T ss_conf             99999999999975078805179999999999999999985407247994389840799935873771687523677776


Q ss_pred             CCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCEECCEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEEEC
Q ss_conf             46867863169513147341899970033035402268699997889999985437999998864289852687999866
Q gi|255764478|r  250 CNPNIPTEEVFTAPHARRVEGYATSTKPLVYQGMLIENIRVRFDQGRVVEASASKGEEMLNKILDIDEGARRLGEVALVP  329 (418)
Q Consensus       250 ~~~NlP~GEVftaP~~~~vnG~i~~d~p~~~~G~~~~~~~l~f~~G~vv~~~a~~~~~~l~~~l~~d~~a~~igE~~ig~  329 (418)
                      +.+|||+|||||+|++++|||+|++|+|+.+.|++++||+|+||+|+||+++|++++++|++++++||||+||||||||+
T Consensus       243 ~~~NlP~gEvft~P~~~~~~G~i~~~~~~~~~G~~~~~i~l~f~~G~vv~~~~~~~~~~l~~~l~~d~~a~~~gE~~ig~  322 (413)
T d1zjca1         243 FIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVALVP  322 (413)
T ss_dssp             EESBSSCCCEEECEEEEEEEEEEECSSCEEETTEEEEEEEEEEETTEEEEEEEEESHHHHHHHHTSSGGGGSEEEEEECC
T ss_pred             CCCCCCCCCEEEEECCCCEEEEEEECEECCCCCEECCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECC
T ss_conf             64889980068613158613799978252629883248189998999999974765999987640486653676775316


Q ss_pred             CCCCHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEECCCEEEEEEEECCCCEEE
Q ss_conf             86200110120033232057526412267750003676678834432069850124587996788199999817995999
Q gi|255764478|r  330 HSSLLSKMNTLFYDTLFDENAASHIAFGQCYSKCFKKPDNALDNWLEERGGNSSITHIDWMIGSGDMNVDGLTKNGVLVP  409 (418)
Q Consensus       330 n~~~i~~~~~l~~n~L~DEk~~~H~A~G~~y~~~~~~~~~~~~~~~~~~g~n~S~~H~D~~~~~~~i~vdgi~~dG~~~~  409 (418)
                      ||+|+++++++|||||||||++||||||+|||+|+.++..++++++..+|.|.|++|||+||++++++||||++||+.++
T Consensus       323 n~~~~~~~~~~~~~~L~DEkgt~H~a~G~~Y~~~~~~~~~~~~~~~~~~G~n~s~~H~D~~i~~~~~~i~gv~~dG~~~~  402 (413)
T d1zjca1         323 DDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKEL  402 (413)
T ss_dssp             SSSTTGGGCCCCSSHHHHTTTSCEEEEECCCGGGBTTGGGCCHHHHHHHTCCCCSCEEEEECCCTTCEEEEECTTSCEEE
T ss_pred             CCCCCCCCCCCCCCEEEECCCCEEEECCCCCHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEE
T ss_conf             88654343544245158748974466775642111366557814540179867645787634787156899981897889


Q ss_pred             EEECCEECC
Q ss_conf             886784549
Q gi|255764478|r  410 IMRGGEWAF  418 (418)
Q Consensus       410 i~~~G~~~~  418 (418)
                      |||||+||.
T Consensus       403 I~~~G~f~~  411 (413)
T d1zjca1         403 VFENGNWAS  411 (413)
T ss_dssp             EEETTEECT
T ss_pred             EEECCEECC
T ss_conf             998999767


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: Thermophilic metalloprotease-like
superfamily: Thermophilic metalloprotease-like
family: Thermophilic metalloprotease (M29)
domain: Aminopeptidase S, AMPS
species: Staphylococcus aureus [TaxId: 1280]