RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|255764480|ref|YP_003084343.1| hypothetical protein CLIBASIA_03352 [Candidatus Liberibacter asiaticus str. psy62] (57 letters) >d1ds1a_ b.82.2.2 (A:) Clavaminate synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 323 Score = 24.3 bits (52), Expect = 2.6 Identities = 2/21 (9%), Positives = 8/21 (38%) Query: 2 MFWHCDSRFAEDKPDIQGFLS 22 + +H + + +P+ Sbjct: 140 LEFHTEMAYHRLQPNYVMLAC 160 >d2g39a1 c.124.1.2 (A:3-223) Acetyl-CoA hydrolase (PA5445) {Pseudomonas aeruginosa [TaxId: 287]} Length = 221 Score = 23.7 bits (51), Expect = 4.4 Identities = 3/22 (13%), Positives = 6/22 (27%) Query: 14 KPDIQGFLSYGSSTIYHTTALR 35 QG + +S + Sbjct: 132 AITEQGHIVPTTSVGNSASFAI 153 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.324 0.134 0.455 Gapped Lambda K H 0.267 0.0620 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 236,826 Number of extensions: 7142 Number of successful extensions: 18 Number of sequences better than 10.0: 1 Number of HSP's gapped: 18 Number of HSP's successfully gapped: 4 Length of query: 57 Length of database: 2,407,596 Length adjustment: 27 Effective length of query: 30 Effective length of database: 2,036,886 Effective search space: 61106580 Effective search space used: 61106580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 47 (22.1 bits)