HHsearch alignment for GI: 255764481 and conserved domain: COG1043

>COG1043 LpxA Acyl-[acyl carrier protein].
Probab=100.00  E-value=0  Score=629.48  Aligned_cols=259  Identities=47%  Similarity=0.774  Sum_probs=255.4

Q ss_pred             CCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf             99756551088898599889899565598899899889898668689168468655311434223210233312222223
Q gi|255764481|r    6 NNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNFVGTE   85 (271)
Q Consensus         6 ~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g~~~~   85 (271)
T Consensus         2 ~~~~IHPTAiIe~gA~ig~~V~IGpf~iIg~~V~ig~~t~l~shvvv~G~T~IG~~n~I~~~A~iG~~pQdlKykge~T~   81 (260)
T COG1043           2 KMAKIHPTAIIEPGAEIGEDVKIGPFCIIGPNVEIGDGTVLKSHVVVEGHTTIGRNNRIFPFASIGEDPQDLKYKGEPTR   81 (260)
T ss_pred             CCCCCCCCEEECCCCCCCCCCEECCEEEECCCCEECCCCEECCCEEEECCCEECCCCEEECCCCCCCCCCCCCCCCCCEE
T ss_conf             75645762152787882899888833798897198899588343799677077789879111042898754502798427


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCE
Q ss_conf             32222222122443211112222221223320000166554331001234432234524553214860652344433650
Q gi|255764481|r   86 LLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRVVFGGGSAVHQFT  165 (271)
Q Consensus        86 v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~~IG~~~~v~~~v  165 (271)
T Consensus        82 l~IG~~n~IRE~vTi~~GT~~g~g~T~IGdnnl~May~HVAHDC~iGn~~ilaNnatLAGHV~igD~aiiGG~saVHQF~  161 (260)
T COG1043          82 LIIGDNNTIREFVTIHRGTVQGGGVTRIGDNNLIMAYAHVAHDCVIGNNCILANNATLAGHVEVGDYAIIGGLSAVHQFV  161 (260)
T ss_pred             EEECCCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCEECCCEEEECCCEEECEEEECCEEEECCCCEEEEEE
T ss_conf             99889975866889861544786159977887898731031344456717996686685407887789974752377788


Q ss_pred             EEECCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf             64047435013211223333100010745323344201444288899999999999999727998999999999642589
Q gi|255764481|r  166 RIGKYAFIGGMTGVVHDVIPYGILNGNPGALRGVNVVAMRRAGFSRDTIHLIRAVYKQIFQQGDSIYKNAGAIREQNVSC  245 (271)
Q Consensus       166 ~IG~~a~ig~gs~V~kdVpp~~~~~G~pa~~~~~N~~glkR~g~s~e~i~~l~~ayr~lfr~~~~l~e~l~~l~~~~~~~  245 (271)
T Consensus       162 rIG~~amiGg~S~v~~DVpPy~~~~Gn~a~l~GlN~vGlkRrgf~~e~i~alr~ayk~lfr~~~~~~e~~~~i~~~~~~~  241 (260)
T COG1043         162 RIGAHAMIGGLSAVSQDVPPYVIASGNHARLRGLNIVGLKRRGFSREEIHALRKAYKLLFRSGLTLREALEEIAEEYADN  241 (260)
T ss_pred             EECCHHEECCCHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCC
T ss_conf             97401123441010367798388528704421213220110699989999999999998018988899999999884278


Q ss_pred             HHHHHHHHHHHHCCCCCCC
Q ss_conf             8999999998615888737
Q gi|255764481|r  246 PEVSDIINFIFADRKRPLS  264 (271)
Q Consensus       246 ~~v~~~~~Fi~~s~rRgi~  264 (271)
T Consensus       242 ~~v~~~~dFi~~s~r~~~r  260 (260)
T COG1043         242 PEVKEFIDFIASSSRGIIR  260 (260)
T ss_pred             HHHHHHHHHHHHCCCCCCC
T ss_conf             6799999998642466669