HHsearch alignment for GI: 255764481 and conserved domain: PRK13627
>PRK13627 carnitine operon protein CaiE; Provisional.
Probab=99.92 E-value=2.3e-25 Score=179.13 Aligned_cols=146 Identities=23% Similarity=0.338 Sum_probs=104.8
Q ss_pred CCCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCC
Q ss_conf 79975655108889859988989956559889989988989866868916846865531143422321023331222222
Q gi|255764481|r 5 GNNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNFVGT 84 (271)
Q Consensus 5 ~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g~~~ 84 (271)
T Consensus 8 g~~P~i~~~afIap~A------------------------------~viGdV~ig~~~sIw~~aVlRG---------D~~ 48 (196)
T PRK13627 8 GLIPVVHPTAFVHPSA------------------------------VLIGDVIVGAGVYIGPLASLRG---------DYG 48 (196)
T ss_pred CCCCCCCCCEEECCCC------------------------------EEEEEEEECCCCEECCCEEEEC---------CCC
T ss_conf 9587229983889999------------------------------8998499999988977708956---------887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCC
Q ss_conf 33222222212244321111222222122332000016655433100123443223452455321486065234443365
Q gi|255764481|r 85 ELLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRVVFGGGSAVHQF 164 (271)
Q Consensus 85 ~v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~~IG~~~~v~~~ 164 (271)
T Consensus 49 ~I~IG~~tNIQD~~viH~~~---~~~~~IG------------------~~vtIGH~ailhg-c~Igd~~lIGmgavVldg 106 (196)
T PRK13627 49 RLIVQAGANLQDGCIMHGYC---DTDTIVG------------------ENGHIGHGAILHG-CVIGRDALVGMNSVIMDG 106 (196)
T ss_pred CEEECCCCEECCCCEEECCC---CCCCEEC------------------CCEEECCCEEEEE-EEEECCCEECCCCEEECC
T ss_conf 17989986767983781489---9985888------------------9805878729963-499489788469799288
Q ss_pred EEEECCCEEECCCCCCCC--CCCCCHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHH
Q ss_conf 064047435013211223--33310001074532334420144428889999999999
Q gi|255764481|r 165 TRIGKYAFIGGMTGVVHD--VIPYGILNGNPGALRGVNVVAMRRAGFSRDTIHLIRAV 220 (271)
Q Consensus 165 v~IG~~a~ig~gs~V~kd--Vpp~~~~~G~pa~~~~~N~~glkR~g~s~e~i~~l~~a 220 (271)
T Consensus 107 a~Ig~~~iI~AgslV~~g~~ip~~~L~~G~PAk~v---------R~lt~~ei~~~~~~ 155 (196)
T PRK13627 107 AVIGEESIVAAMSFVKAGFQGEKRQLLMGTPARAV---------RSVSDQELHWKRLN 155 (196)
T ss_pred CEECCCCEECCCCEECCCCCCCCCCEEEECCEEEE---------ECCCHHHHHHHHHH
T ss_conf 89999989976864579949389819987781681---------14999999998876