HHsearch alignment for GI: 255764481 and conserved domain: TIGR01853
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro: IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (2.3.1 from EC) catalyses an early step in lipid A biosynthesis : UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] = UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + [acyl carrier protein] Members of this family also contain a hexapeptide repeat (IPR001451 from INTERPRO). This entry represents the non-repeating region of LPXD proteins.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0009245 lipid A biosynthetic process.
Probab=100.00 E-value=1.4e-45 Score=304.88 Aligned_cols=193 Identities=27% Similarity=0.492 Sum_probs=175.5
Q ss_pred CCCCCCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECC------C
Q ss_conf 5057997565510888985998898995655988998998898986686891684686553114342232102------3
Q gi|255764481|r 2 SRMGNNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDT------Q 75 (271)
Q Consensus 2 ~~i~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~------q 75 (271)
T Consensus 114 a~~~~~v~I~pnvvIG~~v~IG~~~~I~pg~~iG~~v~IG~~~~i~~~v~i~~~~~lG~nV~I~~GaVIG~DGFGya~~~ 193 (336)
T TIGR01853 114 AKIGEGVTIGPNVVIGAGVEIGENVIIGPGVVIGDDVVIGDGSVIYPNVVIYERVQLGKNVIIHAGAVIGSDGFGYAHTA 193 (336)
T ss_pred CCCCCCCEECCEEEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEEEECCEECCEEEECCCCEECCCCCCEEECC
T ss_conf 31078436875417888868778636357768768868799677806708972415647158768878867873203578
Q ss_pred CCCC-C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCE
Q ss_conf 3312-2-2222332222222122443211112222221223320000166554331001234432234524553214860
Q gi|255764481|r 76 SKYH-N-FVGTELLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRV 153 (271)
Q Consensus 76 d~~~-~-g~~~~v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~ 153 (271)
T Consensus 194 ~g~~~KI~q~G~ViI~D~VEIGANTtIDRg~~~---dT~i~~gtKIDNLVQIAHNc~IG~n~~ivaqvGiaGSt~iG~~V 270 (336)
T TIGR01853 194 NGGHVKIPQIGRVIIEDDVEIGANTTIDRGAFD---DTVIGEGTKIDNLVQIAHNCRIGENCIIVAQVGIAGSTKIGRNV 270 (336)
T ss_pred CCCEEEEEEECEEEEECEEEECCCCHHHCCCCC---CCEEECCCEECCEEEEEEEEEECCCCEEEEEEECCEEEEECCEE
T ss_conf 897154413024896023387468702110214---71872384662315741334626642789642011346755806
Q ss_pred EECCCCCCCCCEEEECCCEEECCCCCCCCCCCCCHHHH--CCCCCC
Q ss_conf 65234443365064047435013211223333100010--745323
Q gi|255764481|r 154 VFGGGSAVHQFTRIGKYAFIGGMTGVVHDVIPYGILNG--NPGALR 197 (271)
Q Consensus 154 ~IG~~~~v~~~v~IG~~a~ig~gs~V~kdVpp~~~~~G--~pa~~~ 197 (271)
T Consensus 271 ~~GGqvGv~GHl~IgD~v~i~A~sgV~~~~~~~~~ygggi~Pa~~~ 316 (336)
T TIGR01853 271 ILGGQVGVAGHLEIGDNVTIGAKSGVTKSVPPNGRYGGGIIPAMPQ 316 (336)
T ss_pred EECCEEEEECEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCCHH
T ss_conf 9626026511089438348845122067779886010011141202