HHsearch alignment for GI: 255764481 and conserved domain: TIGR01853
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro: IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (2.3.1 from EC) catalyses an early step in lipid A biosynthesis : UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] = UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + [acyl carrier protein] Members of this family also contain a hexapeptide repeat (IPR001451 from INTERPRO). This entry represents the non-repeating region of LPXD proteins.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0009245 lipid A biosynthetic process.
Probab=99.97 E-value=2.8e-32 Score=222.32 Aligned_cols=202 Identities=26% Similarity=0.380 Sum_probs=169.5
Q ss_pred CCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 97565510888985998898995655988998998898986686891684686553114342232102333122222233
Q gi|255764481|r 7 NPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNFVGTEL 86 (271)
Q Consensus 7 ~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g~~~~v 86 (271)
T Consensus 101 ~~gi~p~a~~~~~a~~~~~v~I~pnvvIG~~v~IG~~~~I~pg~~iG~~v~IG~~~~i~~~v~i~~------------~~ 168 (336)
T TIGR01853 101 EAGIHPTAVVEPSAKIGEGVTIGPNVVIGAGVEIGENVIIGPGVVIGDDVVIGDGSVIYPNVVIYE------------RV 168 (336)
T ss_pred CCCCCCCCCCCCCCCCCCCCEECCEEEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEEEE------------CC
T ss_conf 035676873056531078436875417888868778636357768768868799677806708972------------41
Q ss_pred CCCCCCCCCCCCCCCCC-----CCC--------CCCCCCCCCCCHHCCCCCCCC----CCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 22222221224432111-----122--------222212233200001665543----3100123443223452455321
Q gi|255764481|r 87 LVGKKCVIREGVTINRG-----TVE--------YGGKTIVGDNNFFLANSHVAH----DCKLGNGIVLSNNVMIAGHVIV 149 (271)
Q Consensus 87 ~IG~~~~Ire~v~I~~g-----t~~--------~~~~T~IG~~~~i~~~~hI~H----d~~IG~~vii~n~~~l~G~v~I 149 (271)
T Consensus 169 ~lG~nV~I~~GaVIG~DGFGya~~~~g~~~KI~q~G~ViI~D~VEIGANTtIDRg~~~dT~i~~gtKIDNLVQIAHNc~I 248 (336)
T TIGR01853 169 QLGKNVIIHAGAVIGSDGFGYAHTANGGHVKIPQIGRVIIEDDVEIGANTTIDRGAFDDTVIGEGTKIDNLVQIAHNCRI 248 (336)
T ss_pred EECCEEEECCCCEECCCCCCEEECCCCCEEEEEEECEEEEECEEEECCCCHHHCCCCCCCEEECCCEECCEEEEEEEEEE
T ss_conf 56471587688788678732035788971544130248960233874687021102147187238466231574133462
Q ss_pred CCCEEECCCCCCCCCEEEECCCEEECCCCCCCC--CCCCCHHHHCCCCCCCCCCCHHHHCC--CCHHHHHHHHHHH
Q ss_conf 486065234443365064047435013211223--33310001074532334420144428--8899999999999
Q gi|255764481|r 150 DDRVVFGGGSAVHQFTRIGKYAFIGGMTGVVHD--VIPYGILNGNPGALRGVNVVAMRRAG--FSRDTIHLIRAVY 221 (271)
Q Consensus 150 gd~~~IG~~~~v~~~v~IG~~a~ig~gs~V~kd--Vpp~~~~~G~pa~~~~~N~~glkR~g--~s~e~i~~l~~ay 221 (271)
T Consensus 249 G~n~~ivaqvGiaGSt~iG~~V~~GGqvGv~GHl~IgD~v~i~A~sgV~~~~~~~-~~ygggi~Pa~~~~~w~k~~ 323 (336)
T TIGR01853 249 GENCIIVAQVGIAGSTKIGRNVILGGQVGVAGHLEIGDNVTIGAKSGVTKSVPPN-GRYGGGIIPAMPQKEWLKIA 323 (336)
T ss_pred CCCCEEEEEEECCEEEEECCEEEECCEEEEECEEEECCCCEEEEECCCCCCCCCC-CCCCEEECCCCHHHHHHHHH
T ss_conf 6642789642011346755806962602651108943834884512206777988-60100111412024789999