>TIGR03536 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) is involved in the succinylated branch of the "lysine biosynthesis via diaminopimelate (DAP)" pathway (GenProp0125). This model represents a clade of DapD sequences most closely related to the actinobacterial DapD family represented by the TIGR03535 model. All of the genes evaluated for the seed of this model are found in genomes where the downstream desuccinylase is present, but known DapD genes are absent. Additionally, many of the genes identified by this model are found proximal to genes involved in this lysine biosynthesis pathway.

Probab=96.89  E-value=0.0017  Score=42.42  Aligned_cols=33  Identities=9%  Similarity=0.189  Sum_probs=15.3

Q ss_pred             CEECCCEEECCCCCCCCCEEEECCCEEECCCCCCC
Q ss_conf             32148606523444336506404743501321122
Q gi|255764481|r  147 VIVDDRVVFGGGSAVHQFTRIGKYAFIGGMTGVVH  181 (271)
Q Consensus       147 v~Igd~~~IG~~~~v~~~v~IG~~a~ig~gs~V~k  181 (271)
T Consensus       251 isiG~~cLlGANsg~--GI~LGD~C~veaGlyvta  283 (341)
T TIGR03536       251 ISVGEGCLLGANAGI--GIPLGDRCTVEAGLYITA  283 (341)
T ss_pred             EEECCCCCCCCCCCC--CCCCCCCCEEECCEEEEC
T ss_conf             888732201444555--742489847812449927