HHsearch alignment for GI: 255764481 and conserved domain: cd03350
>cd03350 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is homotrimeric and each subunit contains an N-terminal region with alpha helices and hairpin loops, as well as a C-terminal region with a left-handed parallel alpha-helix (LbH) structural motif encoded by hexapeptide repeat motifs.
Probab=99.27 E-value=1.9e-11 Score=92.02 Aligned_cols=40 Identities=28% Similarity=0.256 Sum_probs=24.2
Q ss_pred CEECCCEEECCCCCCCCCEEEECCCEEECCCCCCCCCCCCCHH
Q ss_conf 3214860652344433650640474350132112233331000
Q gi|255764481|r 147 VIVDDRVVFGGGSAVHQFTRIGKYAFIGGMTGVVHDVIPYGIL 189 (271)
Q Consensus 147 v~Igd~~~IG~~~~v~~~v~IG~~a~ig~gs~V~kdVpp~~~~ 189 (271)
T Consensus 94 v~IG~~avIGAGsVVtkdvp~--y~-~~~g~~~~~~~p~~~~~ 133 (139)
T cd03350 94 VIVGKGAVLAAGVVLTQSTPI--YD-RETGEIYYGRVPPGSVV 133 (139)
T ss_pred CEECCCCEECCCCEEECCCCC--EE-EECCCEEECCCCCCCEE
T ss_conf 799999899979889189884--68-23780970116998787