HHsearch alignment for GI: 255764481 and conserved domain: cd04652
>cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon). eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B gamma subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH domain with 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.
Probab=98.60 E-value=9.5e-08 Score=68.95 Aligned_cols=30 Identities=27% Similarity=0.404 Sum_probs=10.3
Q ss_pred CCCCCEECCCEEECCCCEECCCCEECCCCEE
Q ss_conf 5799756551088898599889899565598
Q gi|255764481|r 4 MGNNPIIHPLALVEEGAVIGPNSLIGPFCCV 34 (271)
Q Consensus 4 i~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I 34 (271)
T Consensus 2 IG~~~~Ig~~~~I~-~SvIG~nc~Ig~~~~i 31 (81)
T cd04652 2 VGENTQVGEKTSIK-RSVIGANCKIGKRVKI 31 (81)
T ss_pred CCCCCEECCCCEEE-CCEECCCCEECCCCEE
T ss_conf 87988999999896-7999799999999689