HHsearch alignment for GI: 255764481 and conserved domain: cd05636
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.91 E-value=6.5e-24 Score=170.03 Aligned_cols=152 Identities=16% Similarity=0.141 Sum_probs=114.0
Q ss_pred CCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCCC
Q ss_conf 99756551088898599889899565598899899889898668689168468655311434223210233312222223
Q gi|255764481|r 6 NNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQSKYHNFVGTE 85 (271)
Q Consensus 6 ~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~qd~~~~g~~~~ 85 (271)
T Consensus 4 ~~~~I~p~a~I~~~v~Ig~~a~I~~~a~I~~~v~IG~~~~Ig~~~~I~~~~~IG~~~~IG~~~~I~~------------- 70 (163)
T cd05636 4 IEGTVEEGVTIKGPVWIGEGAIVRSGAYIEGPVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVKN------------- 70 (163)
T ss_pred EEEEECCCCEECCCEEECCCCEECCCCEEECCEEECCCCEEEECCCCCCCEEECCEEEECCCEEECC-------------
T ss_conf 2679999999989819999999999999979759989989936412269858613012055124212-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC--------CCCCCCCCCCCCCCCCCCEECCCEEECC
Q ss_conf 32222222122443211112222221223320000166554331--------0012344322345245532148606523
Q gi|255764481|r 86 LLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDC--------KLGNGIVLSNNVMIAGHVIVDDRVVFGG 157 (271)
Q Consensus 86 v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~--------~IG~~vii~n~~~l~G~v~Igd~~~IG~ 157 (271)
T Consensus 71 ~vi~~~~~i~~~~~i--------g~siIG~~v~IGagtvi~n~~~~~~~~~v~~~~~-~~~~~~~~~-G~vIGd~~~IG~ 140 (163)
T cd05636 71 SIIMDGTKVPHLNYV--------GDSVLGENVNLGAGTITANLRFDDKPVKVRLKGE-RVDTGRRKL-GAIIGDGVKTGI 140 (163)
T ss_pred CCCCCCCCCCCCCEE--------CCCEECCCCEECCCEEEECCCCCCCCEEEEECCE-EECCCCEEC-CCEECCCCEECC
T ss_conf 401478432775687--------7729929969889837817767886347840770-623677040-779779979998
Q ss_pred CCCCCCCEEEECCCEEECCCCCC
Q ss_conf 44433650640474350132112
Q gi|255764481|r 158 GSAVHQFTRIGKYAFIGGMTGVV 180 (271)
Q Consensus 158 ~~~v~~~v~IG~~a~ig~gs~V~ 180 (271)
T Consensus 141 ns~I~~G~~IG~~a~IgaGsvVr 163 (163)
T cd05636 141 NVSLNPGVKIGPGSWVYPGCVVR 163 (163)
T ss_pred CCEECCCEEECCCCEECCCCEEC
T ss_conf 98986995999998999997969