HHsearch alignment for GI: 255764481 and conserved domain: cd05636
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.80 E-value=1.3e-19 Score=143.09 Aligned_cols=155 Identities=15% Similarity=0.153 Sum_probs=84.0
Q ss_pred CCCCCCCEECCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEEEEECCCCCEEEECCC--CCCC
Q ss_conf 50579975655108889859988989956559889989988989866868916846865531143422321023--3312
Q gi|255764481|r 2 SRMGNNPIIHPLALVEEGAVIGPNSLIGPFCCVGSEVEIGAGVELISHCVVAGKTKIGDFTKVFPMAVLGGDTQ--SKYH 79 (271)
Q Consensus 2 ~~i~~~~~IhpsA~I~~~a~Ig~~v~Igp~~~I~~~v~IG~~~~I~~~v~I~g~t~IG~~~~I~~~a~Ig~~~q--d~~~ 79 (271)
T Consensus 6 ~~I~p~a~I~~~v~Ig~~a~I~~~a~I~~~v~IG~~~~Ig~~~~I~~~~~IG~~~~IG~~~~I~-~~vi~~~~~i~~~~~ 84 (163)
T cd05636 6 GTVEEGVTIKGPVWIGEGAIVRSGAYIEGPVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVK-NSIIMDGTKVPHLNY 84 (163)
T ss_pred EEECCCCEECCCEEECCCCEECCCCEEECCEEECCCCEEEECCCCCCCEEECCEEEECCCEEEC-CCCCCCCCCCCCCCE
T ss_conf 7999999998981999999999999997975998998993641226985861301205512421-240147843277568
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCC
Q ss_conf 22222332222222122443211112222221223320000166554331001234432234524553214860652344
Q gi|255764481|r 80 NFVGTELLVGKKCVIREGVTINRGTVEYGGKTIVGDNNFFLANSHVAHDCKLGNGIVLSNNVMIAGHVIVDDRVVFGGGS 159 (271)
Q Consensus 80 ~g~~~~v~IG~~~~Ire~v~I~~gt~~~~~~T~IG~~~~i~~~~hI~Hd~~IG~~vii~n~~~l~G~v~Igd~~~IG~~~ 159 (271)
T Consensus 85 ig---~siIG~~v~IGagtvi~n~~~~-~~~~~v~~~~~~~~~~~~~~G~vIGd~~~IG~ns~I~~G~~IG~~a~IgaGs 160 (163)
T cd05636 85 VG---DSVLGENVNLGAGTITANLRFD-DKPVKVRLKGERVDTGRRKLGAIIGDGVKTGINVSLNPGVKIGPGSWVYPGC 160 (163)
T ss_pred EC---CCEECCCCEECCCEEEECCCCC-CCCEEEEECCEEECCCCEECCCEECCCCEECCCCEECCCEEECCCCEECCCC
T ss_conf 77---7299299698898378177678-8634784077062367704077977997999898986995999998999997
Q ss_pred CC
Q ss_conf 43
Q gi|255764481|r 160 AV 161 (271)
Q Consensus 160 ~v 161 (271)
T Consensus 161 vV 162 (163)
T cd05636 161 VV 162 (163)
T ss_pred EE
T ss_conf 96