HHsearch alignment for GI: 255764482 and conserved domain: COG1189

>COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=96.85  E-value=0.0088  Score=34.90  Aligned_cols=100  Identities=14%  Similarity=0.226  Sum_probs=61.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEC-CCCCCCCCCCCCCCCC
Q ss_conf             985578999587843899999986799889999889899998899999806645222530200-4442353100001235
Q gi|255764482|r    9 ATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIE-VDVTLVGENRNLAGLK   87 (225)
Q Consensus         9 ~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~   87 (225)
T Consensus        77 ~~k~kv~LDiGsSTGGFTd~lLq~-gAk~VyavDVG~~Ql~~kLR---------~d~rV~~~E~tN~r~l~~~-----~~  141 (245)
T COG1189          77 DVKGKVVLDIGSSTGGFTDVLLQR-GAKHVYAVDVGYGQLHWKLR---------NDPRVIVLERTNVRYLTPE-----DF  141 (245)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHC-CCCEEEEEECCCCCCCHHHH---------CCCCEEEEECCCHHHCCHH-----HC
T ss_conf             889978998267876299999875-87479999703774378673---------5984799852783118987-----81


Q ss_pred             CCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             765205772265446446547885455652056689899999999862469837870
Q gi|255764482|r   88 NNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLI  144 (225)
Q Consensus        88 ~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i  144 (225)
T Consensus       142 ~~~~d~~v~DvSFI---------------------SL~~iLp~l~~l~~~~~~~v~L  177 (245)
T COG1189         142 TEKPDLIVIDVSFI---------------------SLKLILPALLLLLKDGGDLVLL  177 (245)
T ss_pred             CCCCCEEEEEEEHH---------------------HHHHHHHHHHHHCCCCCEEEEE
T ss_conf             76778479964233---------------------1998889999742788638997