HHsearch alignment for GI: 255764482 and conserved domain: COG2263
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis].
Probab=99.48 E-value=1.6e-13 Score=95.47 Aligned_cols=80 Identities=26% Similarity=0.414 Sum_probs=65.7
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 99855789995878438999999867998899998898999988999998066452225302004442353100001235
Q gi|255764482|r 8 NATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLAGLK 87 (225)
Q Consensus 8 ~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 87 (225)
T Consensus 42 g~l~g~~V~DlG~GTG~La~ga~~l-Ga~~V~~vdiD~~a~ei~r~N~~~-----l~g~v~f~~~dv~~~---------- 105 (198)
T COG2263 42 GDLEGKTVLDLGAGTGILAIGAALL-GASRVLAVDIDPEALEIARANAEE-----LLGDVEFVVADVSDF---------- 105 (198)
T ss_pred CCCCCCEEEECCCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-----HCCCEEEEECCHHHC----------
T ss_conf 8847888888278847889999862-971799993698999999988886-----088469998210114----------
Q ss_pred CCCCCEEEECCCCCCC
Q ss_conf 7652057722654464
Q gi|255764482|r 88 NNFYDHVIMNPPFNER 103 (225)
Q Consensus 88 ~~~fDlii~nPPy~~~ 103 (225)
T Consensus 106 ~~~~dtvimNPPFG~~ 121 (198)
T COG2263 106 RGKFDTVIMNPPFGSQ 121 (198)
T ss_pred CCCCCEEEECCCCCCC
T ss_conf 7766669978997322