HHsearch alignment for GI: 255764482 and conserved domain: COG2265
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].
Probab=99.57 E-value=1.3e-13 Score=96.09 Aligned_cols=140 Identities=17% Similarity=0.194 Sum_probs=106.2
Q ss_pred HHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 43899855789995878438999999867998899998898999988999998066452225302004442353100001
Q gi|255764482|r 5 SLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLA 84 (225)
Q Consensus 5 ~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 84 (225)
T Consensus 287 ~~~~~~~~~~vlDlYCGvG~f~l~lA~~--~~~V~gvEi~~~aV~~A~~NA~~n~i~N----~~f~~~~ae~~~~~~~-- 358 (432)
T COG2265 287 EWLELAGGERVLDLYCGVGTFGLPLAKR--VKKVHGVEISPEAVEAAQENAAANGIDN----VEFIAGDAEEFTPAWW-- 358 (432)
T ss_pred HHHHCCCCCEEEECCCCCCHHHHHHCCC--CCEEEEEECCHHHHHHHHHHHHHCCCCC----EEEEECCHHHHHHHHC--
T ss_conf 9974369977999355887013553124--6579999648999999999999739887----7999586888865100--
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH-CCCCC
Q ss_conf 23576520577226544644654788545565205668989999999986246983787028888999999852-17884
Q gi|255764482|r 85 GLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIARPQSLIQIVNACA-RRIGS 163 (225)
Q Consensus 85 ~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~~~~l~~~l~~~~-~~~~~ 163 (225)
T Consensus 359 --~~~~~d~VvvDPPR~--------------------G~~~~~lk~l~~-~~p~~IvYVSCNP~TlaRDl~~L~~~gy~i 415 (432)
T COG2265 359 --EGYKPDVVVVDPPRA--------------------GADREVLKQLAK-LKPKRIVYVSCNPATLARDLAILASTGYEI 415 (432)
T ss_pred --CCCCCCEEEECCCCC--------------------CCCHHHHHHHHH-CCCCCEEEEECCHHHHHHHHHHHHHCCEEE
T ss_conf --257999899899999--------------------999899999985-589868999768788898999998579048
Q ss_pred EEEEEECCCCCC
Q ss_conf 699981458969
Q gi|255764482|r 164 LEITPLHPREGE 175 (225)
Q Consensus 164 ~~i~~v~~~~~~ 175 (225)
T Consensus 416 ~~v~~~DmFP~T 427 (432)
T COG2265 416 ERVQPFDMFPHT 427 (432)
T ss_pred EEEEEEECCCCC
T ss_conf 787667117996