HHsearch alignment for GI: 255764482 and conserved domain: COG4889
>COG4889 Predicted helicase [General function prediction only].
Probab=95.44 E-value=0.024 Score=32.47 Aligned_cols=136 Identities=18% Similarity=0.205 Sum_probs=68.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHH----------HCCCCEEEEEECCHHHHHHHHHHHHHHCCCC-----------CCCCCE
Q ss_conf 8557899958784389999998----------6799889999889899998899999806645-----------222530
Q gi|255764482|r 10 TGSFHLADLGAGAGAAGLAVAS----------RLHEAQILLAERSPLMAHYARKTLALPANAQ-----------ISKRIS 68 (225)
Q Consensus 10 ~~~~~VLDlGcG~G~~~l~la~----------r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~-----------~~~~~~ 68 (225)
T Consensus 844 d~~vhilDpFtGTGtFi~RlL~alIs~edl~rKf-~~eLhA~eIvLLsYYIAaiNIe~t~~~~~gd~~~F~giaLtDtf~ 922 (1518)
T COG4889 844 DQSVHILDPFTGTGTFIVRLLSALISDEDLKRKF-QKELHAFEIVLLSYYIAAINIEQTAQNRDGDLKNFKGIALTDTFD 922 (1518)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHH
T ss_conf 5770663477874078999999865889999999-855307787999999998627987654148711378715402354
Q ss_pred EECCCCCCCCC----CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHH-----HH----------HCCCCCC----HH
Q ss_conf 20044423531----00001235765205772265446446547885455-----65----------2056689----89
Q gi|255764482|r 69 LIEVDVTLVGE----NRNLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKE-----EA----------HVMLEDS----FE 125 (225)
Q Consensus 69 ~~~~D~~~~~~----~~~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~-----~a----------~~~~~~~----~~ 125 (225)
T Consensus 923 ~~Eed~~d~~~f~~n~erlkrq~~ipI~VIiGNPPYS~gqks~ndnn~nl~ypkLd~rv~~sy~k~STA~nknsl~Dsyi 1002 (1518)
T COG4889 923 YLEEDTLDGDIFGYNNERLKRQKEIPIRVIIGNPPYSAGQKSENDNNQNLSYPKLDKRVYESYGKNSTATNKNSLRDSYI 1002 (1518)
T ss_pred HHCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHH
T ss_conf 42235455654575378998613785499917998765656767655455662278899998720221202342589999
Q ss_pred HHHHHHHHHCCCCCEEEEECC
Q ss_conf 999999986246983787028
Q gi|255764482|r 126 KWIRTACAIMRSSGQLSLIAR 146 (225)
Q Consensus 126 ~~~~~a~~lLkpgG~~~~i~~ 146 (225)
T Consensus 1003 ra~RwasDri~d~GVigFV~N 1023 (1518)
T COG4889 1003 RAIRWASDRIKDNGVIGFVVN 1023 (1518)
T ss_pred HHHHHHHHHCCCCCEEEEEEC
T ss_conf 999987653156855999956