HHsearch alignment for GI: 255764482 and conserved domain: COG5459
>COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=96.25 E-value=0.018 Score=33.21 Aligned_cols=116 Identities=21% Similarity=0.218 Sum_probs=62.6
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 9985578999587843899999986799-889999889899998899999806645222530200444235310000123
Q gi|255764482|r 8 NATGSFHLADLGAGAGAAGLAVASRLHE-AQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLAGL 86 (225)
Q Consensus 8 ~~~~~~~VLDlGcG~G~~~l~la~r~~~-~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 86 (225)
T Consensus 110 ~dfapqsiLDvG~GPgtgl~A~n~i~Pdl~sa~ile~sp~lrkV-~~tl~~nv~t~~---td~r~s~vt~dR----l~lp 181 (484)
T COG5459 110 PDFAPQSILDVGAGPGTGLWALNDIWPDLKSAVILEASPALRKV-GDTLAENVSTEK---TDWRASDVTEDR----LSLP 181 (484)
T ss_pred CCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHH-HHHHHHHCCCCC---CCCCCCCCCHHC----CCCC
T ss_conf 88686102003778752123320337880221234048999999-999986045334---777788650210----4788
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 576520577226544644654788545565205668989999999986246983787028
Q gi|255764482|r 87 KNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIAR 146 (225)
Q Consensus 87 ~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~ 146 (225)
T Consensus 182 ~ad~ytl~i~~~---------------eLl~d~~ek~i~~~ie~lw~l~~~gg~lVivEr 226 (484)
T COG5459 182 AADLYTLAIVLD---------------ELLPDGNEKPIQVNIERLWNLLAPGGHLVIVER 226 (484)
T ss_pred CCCEEEHHHHHH---------------HHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 322363334354---------------444355743188999999986068974999717