HHsearch alignment for GI: 255764482 and conserved domain: PRK00274
>PRK00274 ksgA dimethyladenosine transferase; Reviewed.
Probab=99.01 E-value=1.2e-09 Score=73.65 Aligned_cols=85 Identities=21% Similarity=0.232 Sum_probs=66.4
Q ss_pred HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 24389985578999587843899999986799889999889899998899999806645222530200444235310000
Q gi|255764482|r 4 ASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNL 83 (225)
Q Consensus 4 a~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 83 (225)
T Consensus 32 v~~~~~~~~d~VlEIGpG~G~LT~~Ll~~--~~~v~aiEiD~~l~~~L~~~----------~~~~ii~~D~L~~~~~~~- 98 (267)
T PRK00274 32 VRAADLQPGDRVLEIGPGLGALTEPLLER--AAKVTAIEIDRDLAPILRET----------DNLTIIEGDALKVDLEEL- 98 (267)
T ss_pred HHHCCCCCCCEEEEECCCCCHHHHHHHHH--CCCEEEEECCHHHHHHHHHC----------CCEEEEECHHHHCCHHHH-
T ss_conf 99608999990799638888899999962--68058863688999998504----------786999650664786774-
Q ss_pred CCCCCCCCCEEEECCCCCCCC
Q ss_conf 123576520577226544644
Q gi|255764482|r 84 AGLKNNFYDHVIMNPPFNERI 104 (225)
Q Consensus 84 ~~~~~~~fDlii~nPPy~~~~ 104 (225)
T Consensus 99 ---~~~~~~~vvgNLPY~Iss 116 (267)
T PRK00274 99 ---AEGQPLKVVANLPYNIST 116 (267)
T ss_pred ---CCCCCEEEEECCCCHHHH
T ss_conf ---567872799558830312