HHsearch alignment for GI: 255764482 and conserved domain: PRK00274

>PRK00274 ksgA dimethyladenosine transferase; Reviewed.
Probab=99.01  E-value=1.2e-09  Score=73.65  Aligned_cols=85  Identities=21%  Similarity=0.232  Sum_probs=66.4

Q ss_pred             HHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf             24389985578999587843899999986799889999889899998899999806645222530200444235310000
Q gi|255764482|r    4 ASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNL   83 (225)
Q Consensus         4 a~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   83 (225)
T Consensus        32 v~~~~~~~~d~VlEIGpG~G~LT~~Ll~~--~~~v~aiEiD~~l~~~L~~~----------~~~~ii~~D~L~~~~~~~-   98 (267)
T PRK00274         32 VRAADLQPGDRVLEIGPGLGALTEPLLER--AAKVTAIEIDRDLAPILRET----------DNLTIIEGDALKVDLEEL-   98 (267)
T ss_pred             HHHCCCCCCCEEEEECCCCCHHHHHHHHH--CCCEEEEECCHHHHHHHHHC----------CCEEEEECHHHHCCHHHH-
T ss_conf             99608999990799638888899999962--68058863688999998504----------786999650664786774-


Q ss_pred             CCCCCCCCCEEEECCCCCCCC
Q ss_conf             123576520577226544644
Q gi|255764482|r   84 AGLKNNFYDHVIMNPPFNERI  104 (225)
Q Consensus        84 ~~~~~~~fDlii~nPPy~~~~  104 (225)
T Consensus        99 ---~~~~~~~vvgNLPY~Iss  116 (267)
T PRK00274         99 ---AEGQPLKVVANLPYNIST  116 (267)
T ss_pred             ---CCCCCEEEEECCCCHHHH
T ss_conf             ---567872799558830312