HHsearch alignment for GI: 255764482 and conserved domain: PRK09186
>PRK09186 flagellin modification protein A; Provisional.
Probab=90.53 E-value=1.2 Score=22.87 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=56.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC---C
Q ss_conf 55789995878438999999867--998899998898999988999998066452225302004442353100001---2
Q gi|255764482|r 11 GSFHLADLGAGAGAAGLAVASRL--HEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRNLA---G 85 (225)
Q Consensus 11 ~~~~VLDlGcG~G~~~l~la~r~--~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~---~ 85 (225)
T Consensus 3 ~gK~~lVTGgs~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~~----~~~v~~~~~Dvt~~~~v~~~~~~~~ 77 (255)
T PRK09186 3 EGKTILITGAGGL-IGSALVKAILEAGGIVIAADINKEALNKLLESLGTIE----KTKLTLVELDITDQESLEEFLSKSQ 77 (255)
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHC----CCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9598999795868-9999999999879999999698899999999998705----9807999846899999999999999
Q ss_pred CCCCCCCEEEECC
Q ss_conf 3576520577226
Q gi|255764482|r 86 LKNNFYDHVIMNP 98 (225)
Q Consensus 86 ~~~~~fDlii~nP 98 (225)
T Consensus 78 ~~~g~id~lVnnA 90 (255)
T PRK09186 78 ERYGKIDGAVNCA 90 (255)
T ss_pred HHHCCCCEEEECC
T ss_conf 9819977899757