HHsearch alignment for GI: 255764482 and conserved domain: PRK10611
>PRK10611 chemotaxis methyltransferase CheR; Provisional.
Probab=97.59 E-value=0.00087 Score=40.58 Aligned_cols=118 Identities=10% Similarity=0.156 Sum_probs=67.3
Q ss_pred HHHCCCCC-CCEEEEECCCHHH----HHHHHHHHC----CCCEEEEEECCHHHHHHHHHHH----HHHCCCC-CC-----
Q ss_conf 24389985-5789995878438----999999867----9988999988989999889999----9806645-22-----
Q gi|255764482|r 4 ASLVNATG-SFHLADLGAGAGA----AGLAVASRL----HEAQILLAERSPLMAHYARKTL----ALPANAQ-IS----- 64 (225)
Q Consensus 4 a~~~~~~~-~~~VLDlGcG~G~----~~l~la~r~----~~~~v~gvD~~~~~~~~A~~n~----~~~~~~~-~~----- 64 (225)
T Consensus 107 ~~~~~~~~~~lRIWSAgCSTGEEpYSiAm~l~E~~~~~~~~~~I~aTDIs~~~L~~Ar~GiY~~~~~~~~p~~~~~ryF~ 186 (287)
T PRK10611 107 AEHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRLEELKTLSPQQLQRYFM 186 (287)
T ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHCCCHHHHHHHEE
T ss_conf 99998458975899767788723999999999973237777079999798889999980898889984599999951164
Q ss_pred -----------------CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCCCCCCCCCCHHHHHHHCCCCCCHH
Q ss_conf -----------------25302004442353100001235765205772265--44644654788545565205668989
Q gi|255764482|r 65 -----------------KRISLIEVDVTLVGENRNLAGLKNNFYDHVIMNPP--FNERIGTMTPDKIKEEAHVMLEDSFE 125 (225)
Q Consensus 65 -----------------~~~~~~~~D~~~~~~~~~~~~~~~~~fDlii~nPP--y~~~~~~~~~~~~~~~a~~~~~~~~~ 125 (225)
T Consensus 187 ~~~~~~~g~~~v~~~lr~~V~F~~~NL~~~------~~~~~~~fDlIfCRNVlIYFd------------------~~~q~ 242 (287)
T PRK10611 187 RGTGPHEGLVRVRQELANYVDFQSLNLLAK------QYTVPGPFDAIFCRNVMIYFD------------------KTTQQ 242 (287)
T ss_pred CCCCCCCCEEEECHHHHCCCEEEHHHCCCC------CCCCCCCCEEEEECCCCCCCC------------------HHHHH
T ss_conf 157876661874578763077714006799------888889951999784053678------------------99999
Q ss_pred HHHHHHHHHCCCCCEEEEEC
Q ss_conf 99999998624698378702
Q gi|255764482|r 126 KWIRTACAIMRSSGQLSLIA 145 (225)
Q Consensus 126 ~~~~~a~~lLkpgG~~~~i~ 145 (225)
T Consensus 243 ~vl~~~~~~L~pgG~L~lG~ 262 (287)
T PRK10611 243 EILRRFVPLLKPDGLLFAGH 262 (287)
T ss_pred HHHHHHHHHHCCCCEEEEEC
T ss_conf 99999999868992899838