HHsearch alignment for GI: 255764482 and conserved domain: PRK10611

>PRK10611 chemotaxis methyltransferase CheR; Provisional.
Probab=97.59  E-value=0.00087  Score=40.58  Aligned_cols=118  Identities=10%  Similarity=0.156  Sum_probs=67.3

Q ss_pred             HHHCCCCC-CCEEEEECCCHHH----HHHHHHHHC----CCCEEEEEECCHHHHHHHHHHH----HHHCCCC-CC-----
Q ss_conf             24389985-5789995878438----999999867----9988999988989999889999----9806645-22-----
Q gi|255764482|r    4 ASLVNATG-SFHLADLGAGAGA----AGLAVASRL----HEAQILLAERSPLMAHYARKTL----ALPANAQ-IS-----   64 (225)
Q Consensus         4 a~~~~~~~-~~~VLDlGcG~G~----~~l~la~r~----~~~~v~gvD~~~~~~~~A~~n~----~~~~~~~-~~-----   64 (225)
T Consensus       107 ~~~~~~~~~~lRIWSAgCSTGEEpYSiAm~l~E~~~~~~~~~~I~aTDIs~~~L~~Ar~GiY~~~~~~~~p~~~~~ryF~  186 (287)
T PRK10611        107 AEHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRLEELKTLSPQQLQRYFM  186 (287)
T ss_pred             HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHCCCHHHHHHHEE
T ss_conf             99998458975899767788723999999999973237777079999798889999980898889984599999951164


Q ss_pred             -----------------CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCC--CCCCCCCCCCCHHHHHHHCCCCCCHH
Q ss_conf             -----------------25302004442353100001235765205772265--44644654788545565205668989
Q gi|255764482|r   65 -----------------KRISLIEVDVTLVGENRNLAGLKNNFYDHVIMNPP--FNERIGTMTPDKIKEEAHVMLEDSFE  125 (225)
Q Consensus        65 -----------------~~~~~~~~D~~~~~~~~~~~~~~~~~fDlii~nPP--y~~~~~~~~~~~~~~~a~~~~~~~~~  125 (225)
T Consensus       187 ~~~~~~~g~~~v~~~lr~~V~F~~~NL~~~------~~~~~~~fDlIfCRNVlIYFd------------------~~~q~  242 (287)
T PRK10611        187 RGTGPHEGLVRVRQELANYVDFQSLNLLAK------QYTVPGPFDAIFCRNVMIYFD------------------KTTQQ  242 (287)
T ss_pred             CCCCCCCCEEEECHHHHCCCEEEHHHCCCC------CCCCCCCCEEEEECCCCCCCC------------------HHHHH
T ss_conf             157876661874578763077714006799------888889951999784053678------------------99999


Q ss_pred             HHHHHHHHHCCCCCEEEEEC
Q ss_conf             99999998624698378702
Q gi|255764482|r  126 KWIRTACAIMRSSGQLSLIA  145 (225)
Q Consensus       126 ~~~~~a~~lLkpgG~~~~i~  145 (225)
T Consensus       243 ~vl~~~~~~L~pgG~L~lG~  262 (287)
T PRK10611        243 EILRRFVPLLKPDGLLFAGH  262 (287)
T ss_pred             HHHHHHHHHHCCCCEEEEEC
T ss_conf             99999999868992899838