HHsearch alignment for GI: 255764482 and conserved domain: pfam01170

>pfam01170 UPF0020 Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.

Probab=99.79  E-value=2.1e-18  Score=123.07  Aligned_cols=125  Identities=20%  Similarity=0.285  Sum_probs=98.6

Q ss_pred             CHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf             62438998557899958784389999998679988999988989999889999980664522253020044423531000
Q gi|255764482|r    3 LASLVNATGSFHLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRN   82 (225)
Q Consensus         3 La~~~~~~~~~~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~   82 (225)
T Consensus        20 l~~la~~~~g~~vlDP~CGSGtilIEAa~~~~~~~~~G~Did~~~v~~A~~N~~~~g~---~~~i~~~~~D~~~l~----   92 (171)
T pfam01170        20 MVNLAGWKPGDPLLDPFCGSGTILIEAALMGANVALYGSDIDRRMVRGARINAEAAGV---GDKIEFVQADAADLP----   92 (171)
T ss_pred             HHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCC---CCCEEEEECCHHHCC----
T ss_conf             9998589999978868998789999999961358953675879999999999998289---984699976665387----


Q ss_pred             CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHH
Q ss_conf             0123576520577226544644654788545565205668989999999986246983787028888
Q gi|255764482|r   83 LAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMRSSGQLSLIARPQS  149 (225)
Q Consensus        83 ~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLkpgG~~~~i~~~~~  149 (225)
T Consensus        93 ---~~~~~~d~Iv~nPPYG~r~~~~~----------~~~~ly~~~~~~~~~~~~--g~~~~i~~~~~  144 (171)
T pfam01170        93 ---LLNGSVDTIVTDPPYGIRIGSKG----------ALEKLYPAFLDEAKRVLR--GRLVFATPEKK  144 (171)
T ss_pred             ---CCCCCCEEEEECCCCCCCCCCHH----------HHHHHHHHHHHHHHHHCC--CCEEEEEECCH
T ss_conf             ---98788318998898201136545----------699999999999998689--97899996868