HHsearch alignment for GI: 255764482 and conserved domain: pfam01739
>pfam01739 CheR CheR methyltransferase, SAM binding domain. CheR proteins are part of the chemotaxis signaling mechanism in bacteria. CheR methylates the chemotaxis receptor at specific glutamate residues. CheR is an S-adenosylmethionine- dependent methyltransferase - the C-terminal domain (this one) binds SAM.
Probab=97.81 E-value=0.00015 Score=44.85 Aligned_cols=116 Identities=15% Similarity=0.144 Sum_probs=67.2
Q ss_pred CCCCCEEEEECCCHHH----HHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHH----HHHCCCC-------------
Q ss_conf 9855789995878438----9999998679-----988999988989999889999----9806645-------------
Q gi|255764482|r 9 ATGSFHLADLGAGAGA----AGLAVASRLH-----EAQILLAERSPLMAHYARKTL----ALPANAQ------------- 62 (225)
Q Consensus 9 ~~~~~~VLDlGcG~G~----~~l~la~r~~-----~~~v~gvD~~~~~~~~A~~n~----~~~~~~~------------- 62 (225)
T Consensus 28 ~~~~lrIWsagCStGEE~YSlAi~l~e~~~~~~~~~~~I~atDI~~~~l~~Ar~G~Y~~~~~~~~p~~~~~ryF~~~~~~ 107 (194)
T pfam01739 28 NSRRVRIWSAGCSSGEEPYSLAMLLAETLPNALPWDFKILATDIDLSALEKARAGVYPERELEGLPPELLRRYFTKGAGG 107 (194)
T ss_pred CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCCC
T ss_conf 89955999736889951899999999974325787449999739889999998789889998459999999628607899
Q ss_pred -------CCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf -------2225302004442353100001235765205772265446446547885455652056689899999999862
Q gi|255764482|r 63 -------ISKRISLIEVDVTLVGENRNLAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIM 135 (225)
Q Consensus 63 -------~~~~~~~~~~D~~~~~~~~~~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lL 135 (225)
T Consensus 108 ~~~i~~~lr~~V~F~~~NL~--------~~~~~~~~DlIfCRNVl----------------IYF~~~~~~~vl~~l~~~L 163 (194)
T pfam01739 108 GYRVKPEIKEMVLFEYHNLL--------DYPPLGDFDVIFCRNVL----------------IYFDEETQRKILNRFASAL 163 (194)
T ss_pred CEEECHHHHCCCEEEECCCC--------CCCCCCCEEEEEECCEE----------------EECCHHHHHHHHHHHHHHH
T ss_conf 48768899711668546655--------68876750399980210----------------1379999999999999984
Q ss_pred CCCCEEEEECCHHH
Q ss_conf 46983787028888
Q gi|255764482|r 136 RSSGQLSLIARPQS 149 (225)
Q Consensus 136 kpgG~~~~i~~~~~ 149 (225)
T Consensus 164 ~~gG~L~lG~-~Es 176 (194)
T pfam01739 164 KPGGYLFLGH-SES 176 (194)
T ss_pred CCCCEEEEEC-CCC
T ss_conf 8994999807-566