HHsearch alignment for GI: 255764482 and conserved domain: pfam02384
>pfam02384 N6_Mtase N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.
Probab=99.78 E-value=2.6e-17 Score=116.87 Aligned_cols=141 Identities=15% Similarity=0.198 Sum_probs=98.4
Q ss_pred CCHHHCCCCCCCEEEEECCCHHHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCC
Q ss_conf 66243899855789995878438999999867-------99889999889899998899999806645222530200444
Q gi|255764482|r 2 ILASLVNATGSFHLADLGAGAGAAGLAVASRL-------HEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDV 74 (225)
Q Consensus 2 lLa~~~~~~~~~~VLDlGcG~G~~~l~la~r~-------~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~ 74 (225)
T Consensus 37 lmv~ll~p~~~~~V~DPacGtGgfLi~a~~~i~~~~~~~~~~~i~G~E~~~~~~~la~mNm~lhgi~~--~~~~i~~gds 114 (312)
T pfam02384 37 LIVELLEPKPGESIYDPACGSGGFLIQADKFVKSHDGDTNDISIYGQELNPTTYRLARMNMILHGIEY--NDFGIRHGDT 114 (312)
T ss_pred HHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCC
T ss_conf 99998289999988216877337899999999984378556556368899899999999999847988--7455214776
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC--CCCCHHHHHHHCC---CCCCHHHHHHHHHHHCCCCCEEEEECCHHH
Q ss_conf 23531000012357652057722654464465--4788545565205---668989999999986246983787028888
Q gi|255764482|r 75 TLVGENRNLAGLKNNFYDHVIMNPPFNERIGT--MTPDKIKEEAHVM---LEDSFEKWIRTACAIMRSSGQLSLIARPQS 149 (225)
Q Consensus 75 ~~~~~~~~~~~~~~~~fDlii~nPPy~~~~~~--~~~~~~~~~a~~~---~~~~~~~~~~~a~~lLkpgG~~~~i~~~~~ 149 (225)
T Consensus 115 l~~~~~-----~~~~kfD~IlsNPPFg~k~~~~~~~~~~~~~-~~~~~~~~~~~e~~Fiqh~l~~Lk~~GraaiVlp~g~ 188 (312)
T pfam02384 115 LLSPKF-----EEDKKFDVVVANPPFNQKWDANDNLENDPRF-RAYGVPPKSNADFAFLQHIIYHLSPNGRAAVVLPNGV 188 (312)
T ss_pred CCCCCC-----CCCCCCCEEEECCCCCCCCCCCCCCCCCCCH-HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 557676-----6545511898378646676654321027211-0368788874429999999985699976999955823
Q ss_pred H
Q ss_conf 9
Q gi|255764482|r 150 L 150 (225)
Q Consensus 150 l 150 (225)
T Consensus 189 L 189 (312)
T pfam02384 189 L 189 (312)
T ss_pred C
T ss_conf 1