HHsearch alignment for GI: 255764482 and conserved domain: pfam04445

>pfam04445 DUF548 Protein of unknown function (DUF548). Protein of unknown function found in proteobacteria. In Salmonella typhimurium, expression of this protein is regulated by heat shock.

Probab=97.74  E-value=0.00043  Score=42.27  Aligned_cols=93  Identities=23%  Similarity=0.304  Sum_probs=67.5

Q ss_pred             CCHHHCCCCCCC--EEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCC-----CCCCCCEEECCCC
Q ss_conf             662438998557--899958784389999998679988999988989999889999980664-----5222530200444
Q gi|255764482|r    2 ILASLVNATGSF--HLADLGAGAGAAGLAVASRLHEAQILLAERSPLMAHYARKTLALPANA-----QISKRISLIEVDV   74 (225)
Q Consensus         2 lLa~~~~~~~~~--~VLDlGcG~G~~~l~la~r~~~~~v~gvD~~~~~~~~A~~n~~~~~~~-----~~~~~~~~~~~D~   74 (225)
T Consensus        64 ~l~KAvG~k~~~~p~VlDATAGLG~DafiLAsL--G~~VtliEr~pvl~~LL~Dal~RA~~~~~~~~~~~~rm~L~~gds  141 (235)
T pfam04445        64 AIAKAVGIKGGYLPTVLDATAGLGRDAFVLASL--GCRVRLVERHPVVAALLEDGLQRAYQDPEIGAWLQARLHLLHGSS  141 (235)
T ss_pred             HHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEECCCH
T ss_conf             899986678899983898787757889999818--996999978899999999999998748155799996289983887


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf             2353100001235765205772265446
Q gi|255764482|r   75 TLVGENRNLAGLKNNFYDHVIMNPPFNE  102 (225)
Q Consensus        75 ~~~~~~~~~~~~~~~~fDlii~nPPy~~  102 (225)
T Consensus       142 ~~~l~------~~~~~~DvIYLDPMFP~  163 (235)
T pfam04445       142 ADQLE------PNIDQPDVVYLDPMYPH  163 (235)
T ss_pred             HHHHH------HCCCCCCEEEECCCCCC
T ss_conf             99975------24689878997376887