HHsearch alignment for GI: 255764482 and conserved domain: pfam08704
>pfam08704 GCD14 tRNA methyltransferase complex GCD14 subunit. GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Probab=99.40 E-value=3e-11 Score=82.69 Aligned_cols=136 Identities=17% Similarity=0.175 Sum_probs=100.7
Q ss_pred HHHCCCCCCCEEEEECCCHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 243899855789995878438999999867-9988999988989999889999980664522253020044423531000
Q gi|255764482|r 4 ASLVNATGSFHLADLGAGAGAAGLAVASRL-HEAQILLAERSPLMAHYARKTLALPANAQISKRISLIEVDVTLVGENRN 82 (225)
Q Consensus 4 a~~~~~~~~~~VLDlGcG~G~~~l~la~r~-~~~~v~gvD~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 82 (225)
T Consensus 95 ~~~ldi~PG~~VlEaGtGSGsLT~~Laravgp~G~v~t~E~~e~r~~~A~~n~~~~g~---~~~v~~~~rDv~~~gf~-- 169 (309)
T pfam08704 95 IMMLELKPGSVVCESGTGSGSLSHAIARTVAPTGHLYTFEFHEQRADKAREEFREHGL---DSLVTVTHRDVCKSGFD-- 169 (309)
T ss_pred HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC---CCCEEEEECCHHCCCCC--
T ss_conf 9980989999999836784299999999748886599984478999999999987498---75058898520013666--
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCC-CCCEEEEECC-HHHHHHHHHHHHC-
Q ss_conf 012357652057722654464465478854556520566898999999998624-6983787028-8889999998521-
Q gi|255764482|r 83 LAGLKNNFYDHVIMNPPFNERIGTMTPDKIKEEAHVMLEDSFEKWIRTACAIMR-SSGQLSLIAR-PQSLIQIVNACAR- 159 (225)
Q Consensus 83 ~~~~~~~~fDlii~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~a~~lLk-pgG~~~~i~~-~~~l~~~l~~~~~- 159 (225)
T Consensus 170 --~~~~~~~D~VfLDlp-----------------------~PW~ai~~~~~~Lk~~Gg~l~~f~P~ieQv~r~~~aL~~~ 224 (309)
T pfam08704 170 --TEVSNKADAVFLDLP-----------------------APWEAIPHAAKALKVEGGRLCSFSPCIEQVQRTCLALAAL 224 (309)
T ss_pred --CCCCCCCCEEEECCC-----------------------CHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHC
T ss_conf --445664358997589-----------------------9799889999860689968999919899999999999977
Q ss_pred CCCCEEEEEE
Q ss_conf 7884699981
Q gi|255764482|r 160 RIGSLEITPL 169 (225)
Q Consensus 160 ~~~~~~i~~v 169 (225)
T Consensus 225 gF~~i~t~E~ 234 (309)
T pfam08704 225 GFTEIETIEV 234 (309)
T ss_pred CCCCEEEEEE
T ss_conf 9974079999