HHsearch alignment for GI: 255764483 and conserved domain: COG4964

>COG4964 CpaC Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion].

Probab=99.47  E-value=1.9e-13  Score=99.57  Aligned_cols=79  Identities=22%  Similarity=0.495  Sum_probs=72.1

Q ss_pred             CCCCCEEEEEECCEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEECCCC
Q ss_conf             67762799960828999847665027832844178998179988999960577089999879998899889999727987
Q gi|255764483|r   29 EDNSNRIRIAVGQSLILQFDVLPKQVIVGDDKIVDVLALEKEKTVVITGKNLGSTNIIVLGHNNDILLDTEIATFANEQS  108 (135)
Q Consensus        29 ~~~s~~i~v~vgks~il~l~~p~~~V~VgnP~IADv~~l~~~~~i~v~GK~~G~Tnliv~d~~g~~i~~~~i~V~~~~~~  108 (135)
T Consensus        29 ~~~~~t~~l~~~~~~~v~l~~~~~~i~Vg~p~iada~~~-~~~~iyi~gk~~Gtt~v~~fg~~g~~~~~~~i~v~~d~~~  107 (455)
T COG4964          29 ASATKTLKLELGKSKTVVLPSDADDILVGDPNIADAVLL-TDRSIYILGKSVGTTNVFVFGEEGRSIVSLDIEVTRDTSG  107 (455)
T ss_pred             CCHHHEEEECCCCCEEEECCCCHHEEEECCCCHHCCCCC-CCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCHHH
T ss_conf             641005761468735897246200168758202101304-7864999943788047899868885302200587348578