RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|255764484|ref|YP_003065144.2| hypothetical protein CLIBASIA_03090 [Candidatus Liberibacter asiaticus str. psy62] (43 letters) >gnl|CDD|183889 PRK13199, psaB, photosystem I P700 chlorophyll a apoprotein A2; Provisional. Length = 742 Score = 24.7 bits (54), Expect = 5.1 Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 2 QRLIEILLLSSFAVIAIIFLWA 23 + L + + + F +AIIFLW Sbjct: 40 ENLYQKIFATHFGHLAIIFLWV 61 >gnl|CDD|130403 TIGR01336, psaB, photosystem I core protein PsaB. The core proteins of photosystem I are PsaA and PsaB, homologous integral membrane proteins that form a heterodimer. The heterodimer binds the electron-donating chlorophyll dimer P700, as well as chlorophyll, phylloquinone, and 4FE-4S electron acceptors. This model describes PsaB only. Length = 734 Score = 24.5 bits (53), Expect = 5.8 Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 2 QRLIEILLLSSFAVIAIIFLWA 23 + L + + S F +AIIFLW Sbjct: 39 ENLYQKIFASHFGHLAIIFLWT 60 >gnl|CDD|166673 PLN03032, PLN03032, serine decarboxylase; Provisional. Length = 374 Score = 24.4 bits (53), Expect = 6.5 Identities = 7/21 (33%), Positives = 11/21 (52%) Query: 17 AIIFLWADIREKSISAFFRDI 37 A ++LW +R K RD+ Sbjct: 277 APLYLWYTLRRKGYRGIKRDV 297 >gnl|CDD|181878 PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed. Length = 777 Score = 24.0 bits (53), Expect = 8.5 Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 7 ILLLSSFAVIAIIFLWADIREKSISA 32 + LL A+I + +R ISA Sbjct: 4 LWLLVPLAIILLPLNLPPLRRSLISA 29 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.338 0.148 0.417 Gapped Lambda K H 0.267 0.0660 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 722,865 Number of extensions: 27980 Number of successful extensions: 155 Number of sequences better than 10.0: 1 Number of HSP's gapped: 155 Number of HSP's successfully gapped: 18 Length of query: 43 Length of database: 5,994,473 Length adjustment: 17 Effective length of query: 26 Effective length of database: 5,627,137 Effective search space: 146305562 Effective search space used: 146305562 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.8 bits) S2: 50 (23.2 bits)