BLAST/PSIBLAST alignment of GI: 255764485 and GI: 227823972 at iteration 1
>gi|227823972|ref|YP_002827945.1| pilus assembly protein CpaD [Sinorhizobium fredii NGR234] Length = 234
>gi|227342974|gb|ACP27192.1| pilus assembly protein CpaD [Sinorhizobium fredii NGR234] Length = 234
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 108/176 (61%)
Query: 67 DYRDRYPILMRKVEQIVDIPLLAGRGEIKYPIHDTIRGFLEKYKNDSASVLFLLIPSPTV 126
DYR R+PI++ + E+++DIP+ +G + D IRGF +Y+N S V+ +++P +
Sbjct: 53 DYRTRHPIVIAEGERVIDIPVASGDRRLTAGTRDVIRGFATEYRNASGGVIQIMLPRGSA 112
Query: 127 SSASIRRAVKDIRKIIISSGIPVSSISERIYDADYGMDVDTIRLSYFASKPSAGKCGFWP 186
+S + + KDIR+++ +SG+P + E Y+A D IRLSY A CG WP
Sbjct: 113 NSHAAQIVRKDIRRLLAASGVPPKRMIETGYEAVSPGDAAPIRLSYVAITAQTAPCGEWP 172
Query: 187 EDMLGNAKGNRNWTNYGCAYQNNLAAQVVNPLDLFSPRMVTPPDAEQRDKSIQRYR 242
ED+ N NRN+ N+GCA Q+NLAAQ+ NP DL PR ++P DA QR + I +R
Sbjct: 173 EDLTLNTLQNRNYYNFGCASQSNLAAQIANPTDLIGPRQMSPVDAAQRGEVIDAWR 228