HHsearch alignment for GI: 255764486 and conserved domain: PRK09471
>PRK09471 oppB oligopeptide transporter permease; Reviewed.
Probab=99.08 E-value=2.9e-07 Score=64.29 Aligned_cols=208 Identities=12% Similarity=0.082 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49999999999999999999999999999986330557899999999987544899999999999999875322100132
Q gi|255764486|r 253 LIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNGLI 332 (493)
Q Consensus 253 i~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~~~ 332 (493)
T Consensus 90 i~~~lp~Tl~L~~~a~~i~~~lgi~lGi~aa~~~~~~~D~~~~~~~~~~~siP~F~la~lli~iF~~~l~~~P--~~g-- 165 (306)
T PRK09471 90 VASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGFAMTGVVIPSFVVAPLLVMIFAIILHWLP--GGG-- 165 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCC--
T ss_conf 9988899999999999999999999999999834751619999999999998999999999889997217637--788--
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 342103557530179999999988776899999998621-2999988766088568999999998303369999999999
Q gi|255764486|r 333 TGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSI-PRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMTAS 411 (493)
Q Consensus 333 ~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al~~v-p~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~~~ 411 (493)
T Consensus 166 ----~~~~~~~~liLP~~~l~l~~~~~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~rh~lrnal~P~it~~~~~~~ 241 (306)
T PRK09471 166 ----WNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFV 241 (306)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf ----8752078875369999999999999999999999987799999998699840073001298429999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998759999999412225786704671127999999850223457545899999999999999999999999999
Q gi|255764486|r 412 RTIGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIYAMYIMK 486 (493)
Q Consensus 412 RaiGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~a~~i~~ 486 (493)
T Consensus 242 ~ll~GsvivE~----iF~~PG--------iG~l~~~Ai-~~~D-----~p~v~g~~l~~a~~~i~~nll~Dil~~ 298 (306)
T PRK09471 242 GIITGSMVIET----IFGLPG--------IGQLFVNGA-LNRD-----YSLVLSLTILVGALTILFNAIVDVLYA 298 (306)
T ss_pred HHHCCHHHHHH----HHCCCC--------HHHHHHHHH-HHCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98458712109----864767--------599999999-8049-----899999999999999999999999999