HHsearch alignment for GI: 255764486 and conserved domain: PRK09497
>PRK09497 potB spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.91 E-value=7.7e-22 Score=157.40 Aligned_cols=222 Identities=18% Similarity=0.222 Sum_probs=169.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Q ss_conf 749999999999999999999999999999986330557899999999987544899999999999999--875322100
Q gi|255764486|r 252 GLIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPF--LRDISIYMN 329 (493)
Q Consensus 252 Gi~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~--~~~~~~~~~ 329 (493)
T Consensus 60 ~~~~~l~nSl~~a~~~tvi~~~ig~~~A~~l~~~-~~~~r~~~~~l~~~P~~~p~~v~~~~~~~~~~~~G~ln~~l~~lg 138 (285)
T PRK09497 60 LYAEVLLHSLNMALIATLACLVLGYPFAWFLAKL-PHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLGTKGYLNEFLLWLG 138 (285)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 9999999999999999999999999988863016-754389999999999987999999999998143307889999815
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 13234210355753017999999998877689999999862129999887660885689999999983033699999999
Q gi|255764486|r 330 GLITGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMT 409 (493)
Q Consensus 330 ~~~~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~ 409 (493)
T Consensus 139 ~----~~~p~~~l~~~~~vii~~v~~~lPf~~l~l~a~l~~i~~~l~EAA~~lGAs~~~~F~~I~lPl~~Pgi~~~~il~ 214 (285)
T PRK09497 139 V----IDTPIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLV 214 (285)
T ss_pred C----CCCCHHHHCCHHHHHHHHHEEECHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEHHEEEHHHHHHHHHHHHHH
T ss_conf 7----566235423498887875313120677437878840896899999875999789132022081089999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998759999999412225786704671127999999850223457545899999999999999999999999999975
Q gi|255764486|r 410 ASRTIGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIYAMYIMKKYQ 489 (493)
Q Consensus 410 ~~RaiGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~a~~i~~r~r 489 (493)
T Consensus 215 fi~s~~~F~~~~~lgG~----------~~~~l~~~i~~~~~~~~~~-----~~aaA~svil~~i~~~~~~i~~r~~k~~~ 279 (285)
T PRK09497 215 LLPAMGMFYVSDLLGGA----------KNLLIGNVIKSQFLNIRDW-----PFGAATSITLTIVMGLMLLVYYRASKLLN 279 (285)
T ss_pred HHHHHHHHHEEEECCCC----------CCCHHHHHHHHHHHHCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99998876210010489----------7552999999999870690-----69999999999999999999999999953
Q ss_pred HHCC
Q ss_conf 4229
Q gi|255764486|r 490 RKYE 493 (493)
Q Consensus 490 ~~y~ 493 (493)
T Consensus 280 kk~~ 283 (285)
T PRK09497 280 KKVE 283 (285)
T ss_pred CHHC
T ss_conf 0141