HHsearch alignment for GI: 255764486 and conserved domain: PRK10417
>PRK10417 nikC nickel transporter permease NikC; Provisional.
Probab=99.48 E-value=4.9e-11 Score=88.36 Aligned_cols=198 Identities=15% Similarity=0.217 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999998633055789999999998754489999999999999987532210013234210
Q gi|255764486|r 258 IGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNGLITGNYK 337 (493)
Q Consensus 258 ~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~~~~~~~~ 337 (493)
T Consensus 67 r~sl~i~l~~~~~~~~iG~~lG~-~ag~~gg~~d~~~~~~~d~~~~iP~lll~i~l~~~~-------------------- 125 (272)
T PRK10417 67 RVSLGSVMACLLLVLALGLVIGG-SAGLLGGRVDQATMRVADMFMTFPTSILSFFMVGVL-------------------- 125 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHC--------------------
T ss_conf 99999999999999999999999-999718761247777788986286287788888644--------------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3557530179999999988776899999998-621299998876608856899999999830336999999999999875
Q gi|255764486|r 338 SFIEAQSVLTAGLVMGIMLIPYVSSLSEDVI-SSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMTASRTIGE 416 (493)
Q Consensus 338 ~~~~~~s~l~a~l~l~imilP~i~~~~~~al-~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~~~RaiGE 416 (493)
T Consensus 126 ----g~~~~~~il~l~l~~w~~~ar~iR~~~l~~~~~~yV~AAr~~G~s~~~I~~rhilPni~~~i~v~~~~~~~~~Il~ 201 (272)
T PRK10417 126 ----GTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLLGAVIPSLLVLATLDIGHMMLH 201 (272)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ----8972589999999889999999999999999899999999839587783220176763789999999999999999
Q ss_pred HHHHHHHH-CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH
Q ss_conf 99999994-12225786704671127999999850223457545899999999999999999999999999----97542
Q gi|255764486|r 417 TMIVVLAA-GVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIYAMYIMK----KYQRK 491 (493)
Q Consensus 417 Tm~v~m~~-G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~a~~i~~----r~r~~ 491 (493)
T Consensus 202 ~a~LsFLGlG~~p--------p~~~WG~ml~~~~--~~l~~~p--w~~~~P~~~i~l~vl~~nllgd~Lrd~ldP~l~~~ 269 (272)
T PRK10417 202 VAGLSFLGLGVTA--------PTAEWGVMINDAR--QFIWTQP--LLMFWPGLALFISVMAFNLLGDALRDHLDPHLVTE 269 (272)
T ss_pred HHHHHHHCCCCCC--------CCCCHHHHHHHHH--HHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999990478999--------9988999999999--9999784--99999999999999999999999999609664554
Q ss_pred C
Q ss_conf 2
Q gi|255764486|r 492 Y 492 (493)
Q Consensus 492 y 492 (493)
T Consensus 270 ~ 270 (272)
T PRK10417 270 H 270 (272)
T ss_pred C
T ss_conf 6