HHsearch alignment for GI: 255764486 and conserved domain: TIGR03226
>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=99.92 E-value=1.8e-22 Score=161.45 Aligned_cols=277 Identities=18% Similarity=0.172 Sum_probs=192.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 0013203589999999999858999999999999-621224565302343220143222110124545655667749999
Q gi|255764486|r 179 PSFCARSAVEKFIVFLLRNSLLLSIVISFGIIIS-LFANTFKFFSIISATDFFFGIVWDPRFPALGSSNVMGQFGLIPLL 257 (493)
Q Consensus 179 ~~~raR~~vEk~i~~ll~~~s~iAIl~t~gIv~s-l~~es~~ff~~v~~~~flf~~~W~p~~~~~~~~~~~~~~Gi~p~i 257 (493)
T Consensus 29 ~~~~~~r~~~~l~p~lll~p~ll~l~~~~~~Pl~~~~~~s~--~~----~~g~~gl~ny~~~--------f~~~~~~~al 94 (312)
T TIGR03226 29 AHDAAAKPAENLAPALILALAALVLAPLFFWPLALIAELAL--LG----AHGEIGLAAFRHF--------FASHDFRDAL 94 (312)
T ss_pred CCCHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CC----CCCCCCHHHHHHH--------HCCHHHHHHH
T ss_conf 87332244663152899999999999999999999999974--18----9898639999999--------7796799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999998633055789999999998754489999999999999987532210013234210
Q gi|255764486|r 258 IGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNGLITGNYK 337 (493)
Q Consensus 258 ~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~~~~~~~~ 337 (493)
T Consensus 95 ~nTl~~a~~~t~~~lvlG~~lA~~L~r~-~f~g~~~l~~ll~lp~~lP~~v~a~a~~~l~~~----~G-~ln~~L~~l~g 168 (312)
T TIGR03226 95 GNTLQIAFAAAAGALLLGSALAAILFFI-PFPGAELIGRFLDLFIAFPSFLIAFAFIFIYGS----AG-LLNGALMRAFA 168 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CC-HHHHHHHHHCC
T ss_conf 9999999999999999999999999962-376289999999999998899999999999835----77-07799999628
Q ss_pred CC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35----57530179999999988776899999998621299998876608856899999999830336999999999999
Q gi|255764486|r 338 SF----IEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMTASRT 413 (493)
Q Consensus 338 ~~----~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~~~Ra 413 (493)
T Consensus 169 l~~~p~~~l~s~~gVvla~i~~~~Pf~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtLPll~P~i~ag~lL~Fi~~ 248 (312)
T TIGR03226 169 FDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIFPAALPAIAAGGILCFLLT 248 (312)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66774577740999999999998999999999999968978999998849998886787427846899999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87599999994122257867046711279999998502234575458999999999999999999999999999754
Q gi|255764486|r 414 IGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIYAMYIMKKYQR 490 (493)
Q Consensus 414 iGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~a~~i~~r~r~ 490 (493)
T Consensus 249 ~~~F~~~~~lgg~----------~~~tl~~~Iy~~~~~~~d-----~~~AaAlavillv~~l~l~~l~r~~~rR~~~ 310 (312)
T TIGR03226 249 LNEFGILLFIGAA----------GLITLPMAIYSKAILDID-----LPAAAAGALIMIALSLALFALYRLAARRAGE 310 (312)
T ss_pred HHHHCCEEEEECC----------CCEEHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9775411344089----------970179999999987579-----8999999999999999999999999876348