HHSEARCH alignment of GI: 255764486 and SCOP domain: d3d31c1

Alignment
>d3d31c1 f.58.1.1 (C:13-260) Sulfate/molybdate ABC transporter, permease protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.93  E-value=7.3e-24  Score=167.41  Aligned_cols=203  Identities=18%  Similarity=0.231  Sum_probs=164.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74999999999999999999999999999998633055789999999998754489999999999999987532210013
Q gi|255764486|r  252 GLIPLLIGTFYIGFIAMLFSVPIGLLIAIYMAEYAPKKLRAVIKPITEMLVGIPTIVYGFFALSLVGPFLRDISIYMNGL  331 (493)
Q Consensus       252 Gi~p~i~GTl~i~~iA~lia~Pigl~~Aiyl~eya~~~~~~~~~~~iellagiPSVVyG~f~~~~l~p~~~~~~~~~~~~  331 (493)
                      ..+..+.+|+.+++++..+++++|+..|.+++++ +.|.|+.++.+..++..+|++++|+.-...+++.        +..
T Consensus        44 ~~~~~l~~Sl~~a~~s~~i~~~lg~~~a~~~~~~-~~~~~~~~~~l~~~p~~ip~vv~~~~~~~~~~~~--------~~~  114 (248)
T d3d31c1          44 SVISSIFLSLYAGFLATLLALLLGAPTGYILARF-DFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSR--------GLI  114 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCTTHHHHHHHHHGGGTSCHHHHHHHHHHHHSTT--------STT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC--------CCC
T ss_conf             9999999999999999999999999999999864-6512568999999999999720002445203432--------111


Q ss_pred             HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             23421035575301799999999887768999999986212999988766088568999999998303369999999999
Q gi|255764486|r  332 ITGNYKSFIEAQSVLTAGLVMGIMLIPYVSSLSEDVISSIPRSLRDGSLGLGATRSETMKYVIFPAAFPGIAGAILMTAS  411 (493)
Q Consensus       332 ~~~~~~~~~~~~s~l~a~l~l~imilP~i~~~~~~al~~vp~~lreaa~aLGat~~~ti~~vvlP~a~~gI~~~~iL~~~  411 (493)
                      ............+.....+++..+.+|++....+++++++|++++|||..+|+||||+.+||++|..+|+++++.++++.
T Consensus       115 ~~~~~~~~~~~~~~~~iii~~~~~~~p~~~~~~~~~l~~i~~~~~eAA~~lGas~~~~~~~I~lP~~~p~i~~~~~l~f~  194 (248)
T d3d31c1         115 GEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWA  194 (248)
T ss_dssp             TGGGTTTCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             11222211245642001001101100368888899997103368999876310423477898899999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             998759999999412225786704671127999999850223457545899999999999999999999
Q gi|255764486|r  412 RTIGETMIVVLAAGVAARLQFNPFESMTTITVKIMNQLTGDLDFSSPQTLVAFALGLTLFCITFFLNIY  480 (493)
Q Consensus       412 RaiGETm~v~m~~G~~~~~~~~~~~~~~tlt~~I~~~~~g~~~~~~~~~~~~fa~gl~L~~~tl~~N~~  480 (493)
                      ++++|..++.++.|+           ..|++..|.++.. +.+.     ..+.|.+++++++++++..+
T Consensus       195 ~~~~~~~~~~~l~~~-----------~~~~~~~i~~~~~-~~~~-----~~a~a~a~il~~~~l~~~~v  246 (248)
T d3d31c1         195 RAISEFGAVVILAYY-----------PMVGPTLIYDRFI-SYGL-----SASRPIAVLLILVTLSIFLV  246 (248)
T ss_dssp             HHHTCCHHHHHHHCT-----------TCCHHHHHHHHHH-HSTT-----TTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCC-----------CCHHHHHHHHHHH-HCCH-----HHHHHHHHHHHHHHHHHHHH
T ss_conf             999999988733189-----------8409999999999-5589-----99999999999999999998


SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: MetI-like
superfamily: MetI-like
family: MetI-like
domain: Sulfate/molybdate ABC transporter, permease protein
species: Methanosarcina acetivorans [TaxId: 2214]