HHsearch alignment for GI: 255764488 and conserved domain: TIGR02797
>TIGR02797 exbB tonB-system energizer ExbB; InterPro: IPR014164 This entry describes ExbB proteins, part of the MotA/TolQ/ExbB protein family. The paired proteins MotA and MotB, TolQ and TolR, and ExbB and ExbD harness the proton-motive force to drive the flagellar motor, energize the Tol-Pal system, or energize TonB, respectively. Tol-Pal and TonB are both active at the outer membrane. Genomes may have many different TonB-dependent receptors, of which many of those characterised are involved in siderophore transport across the outer membrane..
Probab=97.98 E-value=1.6e-05 Score=54.30 Aligned_cols=91 Identities=15% Similarity=0.326 Sum_probs=69.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHH
Q ss_conf 789899999999999999999621289999999998888899999999999961489----7899986668999999999
Q gi|255764488|r 137 NARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGAILGIIKAMGNLSQ----SPKILGTAIGVSLTGTLLG 212 (290)
Q Consensus 137 ~~~~~~i~~~L~~ei~~~~~~~~~~~~~~~~~a~~aPafGmiGTviGLI~ml~~l~d----~p~~lG~~iA~ALitTlYG 212 (290)
T Consensus 97 G~kE-Rv~~~L~r~e~~~gR~~~~GtG~LATIGa~aPFVGLFGTVWGIMnsFigIs~~qTTnLAVVAPGIAEALLATA~G 175 (213)
T TIGR02797 97 GIKE-RVASRLERIEAAAGRRMSRGTGVLATIGATAPFVGLFGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATALG 175 (213)
T ss_pred CCHH-HHHHHHHHHHHHHCCHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHH
T ss_conf 6146-889999999998330000368720312001253222102775887888766652204000352378999999988
Q ss_pred HHHH---HHHHHHHHHHHH
Q ss_conf 9999---999999999999
Q gi|255764488|r 213 IILS---YSLCNPLTSQIK 228 (290)
Q Consensus 213 v~lA---n~i~~Pia~kl~ 228 (290)
T Consensus 176 LVAAIPAVvIYN~faR~i~ 194 (213)
T TIGR02797 176 LVAAIPAVVIYNVFARSIA 194 (213)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9988548988865875699