BLAST/PSIBLAST alignment of GI: 255764488 and GI: 116250475 at iteration 1
>gi|116250475|ref|YP_766313.1| flagellar motor protein MotA [Rhizobium leguminosarum bv. viciae 3841] Length = 290
>gi|115255123|emb|CAK06197.1| putative chemotaxis motility protein [Rhizobium leguminosarum bv. viciae 3841] Length = 290
Score = 361 bits (927), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 220/290 (75%)
Query: 1 MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
M+ IIG +T C+IG F AMGG+ L QPFE VI+ GAGLG F+MANP+KV+KDSG +
Sbjct: 1 MNIIIGFIVTCGCVIGSFMAMGGDVNALFQPFEFVIIGGAGLGSFIMANPMKVVKDSGKA 60
Query: 61 LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
L E F + + Y D L +LY LM +L+ SRNE E HID+P STIF S PTVL+N
Sbjct: 61 LGEAFKHAVPKERNYLDTLGVLYSLMRDLRTKSRNEIEAHIDNPAESTIFQSAPTVLKNK 120
Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
ELT FICDY+R+II+GNARS+EIE LMDEE++ I+++K+KPYHAI MG+S PAIGIV A
Sbjct: 121 ELTAFICDYVRLIIIGNARSHEIEALMDEELNTIMHDKMKPYHAIQIMGDSFPAIGIVAA 180
Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
+LG+IKAM +++ SP++LG IG +L GT LGI+LSY +C+PL SQIK R KQHRLY+I
Sbjct: 181 VLGVIKAMAHINDSPEVLGHLIGSALVGTFLGILLSYCVCSPLVSQIKVVRNKQHRLYVI 240
Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEVLQYNHNKKAS 290
VK+ L+AYMNG++PQVA+EYGRK + ERPSI+ V QE++ KA+
Sbjct: 241 VKQTLLAYMNGSVPQVALEYGRKTISAYERPSIDAVEQEMMNPGGENKAA 290