RPSBLAST alignment for GI: 255764488 and conserved domain: TIGR03818

>gnl|CDD|163530 TIGR03818, MotA1, flagellar motor stator protein MotA. This model represents one family of MotA proteins which are often not identified by the "transporter, MotA/TolQ/ExbB proton channel family" model, pfam01618. Length = 282

 Score =  319 bits (821), Expect = 4e-88
 Identities = 109/280 (38%), Positives = 177/280 (63%)

Query: 1   MSTIIGLFITILCIIGGFYAMGGNPYILIQPFEIVIVAGAGLGGFVMANPLKVIKDSGVS 60
           M  IIGL + + C+ GG+   GG+   L QP E++I+ GA +G F++ANP KV+K++   
Sbjct: 1   MLKIIGLVVVLGCVFGGYLLAGGHLAALWQPAELLIIGGAAIGAFIIANPPKVLKETLKG 60

Query: 61  LLEIFGYKALGQDTYCDVLKLLYILMYNLKKGSRNETENHIDDPYNSTIFTSIPTVLENN 120
           L ++F     G+  Y D+L LLY L+   ++      E+HI++P  S+IF+  P +L+++
Sbjct: 61  LPKVFKGSKYGKADYLDLLSLLYELLRKARREGLMAIESHIENPEESSIFSKYPKILKDH 120

Query: 121 ELTTFICDYMRMIIVGNARSYEIENLMDEEIDIILYEKLKPYHAISHMGESLPAIGIVGA 180
            L  FICDY+R++++GN   +E+E LM+EEI+   +E LKP HA+  + ++LP  GIV A
Sbjct: 121 HLVEFICDYLRLMVMGNMNPHELEALMEEEIETHHHELLKPAHALQKVADALPGFGIVAA 180

Query: 181 ILGIIKAMGNLSQSPKILGTAIGVSLTGTLLGIILSYSLCNPLTSQIKSTRLKQHRLYII 240
           +LG++  MG++   P++LG  I  +L GT LGI+L+Y    PL + ++    ++ +    
Sbjct: 181 VLGVVITMGSIDGPPEVLGVLIAAALVGTFLGILLAYGFVGPLAAALEQRVEEEIKFLEC 240

Query: 241 VKKALIAYMNGAIPQVAIEYGRKVLPLSERPSIEIVAQEV 280
           VK  L+A +NG  PQ+A+E+GRKV+P   RPS   + + V
Sbjct: 241 VKVTLVASLNGYAPQLAVEFGRKVIPSDVRPSFAELEEWV 280