HHSEARCH alignment of GI: 255764489 and SCOP domain: d1l5xa_

Alignment
>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=100.00  E-value=0  Score=541.75  Aligned_cols=235  Identities=29%  Similarity=0.418  Sum_probs=208.2

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCEEEEEEEE---EEEEECCCHHHHHHHHHH
Q ss_conf             92688268986885699999999854891999817998565032022489705889711---047632727999999987
Q gi|255764489|r    1 MRILLTNDDGIKSKGLITLENIARSISDDIWICAPEMDQSCLANSLTMSRNIACRTISK---KRFAVHGTPVDCVVIALQ   77 (250)
Q Consensus         1 m~ILitNDDG~~a~gl~~l~~~l~~~~~~v~vvAP~~~~S~~~~ait~~~~~~~~~~~~---~~~~v~GtPaDcv~~~l~   77 (250)
                      |||||||||||+||||++|+++|+++| +|+||||++||||+|||||+++|+++++++.   +.|+|+|||||||++||+
T Consensus         1 M~ILlTNDDGi~a~Gl~~L~~~l~~~g-~V~vvAP~~~~Sg~g~ait~~~pl~~~~~~~~~~~~~~v~GTPaDCV~lgl~   79 (276)
T d1l5xa_           1 MKILVTNDDGVHSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLATF   79 (276)
T ss_dssp             CEEEEECSSCTTCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHHH
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHCC-CEEEEECCCCCCCCCCCEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHC
T ss_conf             959997279989888999999998569-9899930998767625530799857999624884379973752645431021


Q ss_pred             HCCCCCCCEEEECCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHH
Q ss_conf             50464541999714888531023334-577789988987189853222001356-----766147888884999999986
Q gi|255764489|r   78 KMSDKKPDLILSGVNVGTNTSNHVAY-SGTLAAAFEGSLQGIRSFALSQAYTYE-----NMIPWEVSETHAPRVLRQLLK  151 (250)
Q Consensus        78 ~l~~~~pDlViSGiN~G~N~g~~v~y-SGTvgAA~ea~~~GipsIAiS~~~~~~-----~~~~~~~a~~~~~~ii~~l~~  151 (250)
                      ++ ++||||||||||+|.|+|.+++| ||||||||||+++|||||||||++...     ....|+.+.+++.++++++++
T Consensus        80 ~~-~~~pDlVvSGIN~G~N~G~dv~~~SGTVgAA~Ea~~~GipsIA~S~~~~~~~~~~~~~~~~e~~~~~i~~l~~~~l~  158 (276)
T d1l5xa_          80 GL-GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNNKEAVEIMGAVVSSTASYVLK  158 (276)
T ss_dssp             HH-TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CC-CCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             57-99977899787677667840687116777899898618883156502257651224304567777777999999986


Q ss_pred             CCCCCCC-EEECCCCCCCCHHCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHH-HHCCCEEEE
Q ss_conf             7786673-54314567881015883891376654355427840688651699723677778988550789-968988990
Q gi|255764489|r  152 TQIPNTT-LCNINFPRCSPEEVQKTVVTAQGKPCFSIDAKQISTNDNMSHYCLTFGDHLKNLCEKSDAFA-IQHNMISVT  229 (250)
Q Consensus       152 ~~~p~~~-vlNINiP~~~~~~ikg~k~t~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~e~TD~~A-l~~GyISVT  229 (250)
                      +++|.+. +||||||.++..++|+ ++|+++++.|...+.+..++++..|||+.. +. .+.+++||.++ +++||||||
T Consensus       159 ~~~p~~~~vlNVN~P~~~~~~ik~-~~t~~g~~~~~~~~~~~~dp~g~~yywl~g-~~-~~~~~~tD~~a~l~~GyISVT  235 (276)
T d1l5xa_         159 NGMPQGVDVISVNFPRRLGRGVRA-KLVKAAKLRYAQQVVERVDPRGVRYYWLYG-RD-LAPEPETDVYVVLKEGGIAIT  235 (276)
T ss_dssp             HCSCTTCSEEEEEECSCCCTTCCE-EECBCCSCSBCSCCEEEECTTSCEEEECSC-SB-CCCCTTBHHHHHHTSCCEEEE
T ss_pred             CCCCCCCEECCCCCHHCCCCCCCC-CEEEECCCCCCCCEEEEECCCCCEEEEECC-CC-CCCCCCCCHHHHHHCCEEEEE
T ss_conf             565558501257810104546764-268725635543047865799976886157-75-788999889999979989994


Q ss_pred             CCCCCCCCHHH
Q ss_conf             21535648899
Q gi|255764489|r  230 PITTDLTDYNS  240 (250)
Q Consensus       230 PL~~DlT~~~~  240 (250)
                      ||++|||+|+.
T Consensus       236 PL~~DlT~~d~  246 (276)
T d1l5xa_         236 PLTLNLNAVDA  246 (276)
T ss_dssp             EECCCCBSSCC
T ss_pred             EEEECCCCHHH
T ss_conf             61105867577


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog PAE2908 (SurE-alpha)
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]